| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2613 |
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| Symbol | |
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| ID | 5455901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2819661 |
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| End bp | 2821022 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878190 |
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| Product | sodium:galactoside symporter family protein |
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| Protein accession | YP_001413878 |
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| Protein GI | 154253054 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.777957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.0752663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCT TGTCGTCGTG GCGTCTGGCC GCGTTCTCTG GGCCCGCTAT TCCCATCGGC
GCGCTTGGCC TTCCGATCGG CGTCTACCTG CCGCATTTCT ATGCCGGGCC GATGGGGCTC
GGACTTGCGG CGGTCGGCAC GATCTTCATG CTGGCGCGGT TCTGGGACGT CTTCACCGAT
CCGGCGATGG GGGTGCTCTC CGACAAGTTT CCCTCGCGCT GGGGCAGGCG GCGGCACTGG
ATCGTGCTGT CGGTGCCGAT CCTCATGCTC TCGGCCTATA TGGTCTTCGT ACCGACGGCG
CCGGTGTCGA GCTTCTATCT GCTGGCATGG ATGTTCTTTC TCTATATCGG CTGGACGCTG
CTGACGCTGT CGCATATGGC GTGGGCGGCG GAGCTTTCCG ACGATTATAA CGAACGCTCG
CGCATTCAGG GTTTCCGCGA GGCGTTCCAG TTGCTCGGTG TGCCGCTGGT GCTGCTGCTG
CCGGCGATGA TCGAACGGAT GGGGCCGGAG AACATGGAGG CGGCGCGCGT CGCCTCGATG
GGCTGGTTCA TCATCATCGT GCTGCCCATC GCGATCGGCC TCAACCTCTG GCTGGTGCCG
GAGAAGAAGG CGAAGCCAGA GCGGCATGTG AGCTTCATCG CGTCGGTCGT GCCGCTGTTC
CGGAACAGCC CGCTCAGGCG GCTGCTGGCG GCGGATTTCC TTTCGGGCTT CGCTGGCACG
GCGCTGGCGT CGATGTATAT GTATGAGGCG ACGCTGGTCT GGGGCGTCGG TTCGTCGGCG
AGCTTGTTGC TGCTGCTCTA TTTCTTCGGC GGCATCGGCT TCATCCCGCT GGTGCTGAAG
CTCAGCTATT ATCTCGGCAA GCACCGGACG GTGGTGGTGG CGGGACTGTT CAACGTCTGC
TTTCCGCCGG TCATTTTCCT CATTCCCTTC GGCAATGTCT GGGTGGCGGC GGCGGTGCTG
TTCTTCCTCG GCGTCAATGT CGGTACGACG ACGACGCTTT ATCGCTCGAT GATGGCGGAT
GTGGCCGATC TCGACGAGCT GGAGACGGGG CAGAAGCGGA CGGGGCTTTT CTATGCGCTG
CTGACGCTGA CGCAGAAGAT CGGCGGGGCG GTGGCGGTCG GCGTCGTGTT CTGGACGCTG
GCGCTGATCG GCTTCAACCC GGAAGGGGAG AATGCGCCGG GCGCGGTGCA AGGGCTGTCC
TATGTGTTCG TCGCCGTGCC GATGATCTGC AACGCGCTGG TGGCGGCGAT CATCTGGTTC
TATCCGATCG GGCTCAAGGA GCAGGCGGAG TTGCGCCGCA AGCTCGACGA GCGTTTCGTC
GAGGAAGTGG AGCAGACGGA GCGGGTGCCG AACCTGCCGT GA
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| Protein sequence | MTRLSSWRLA AFSGPAIPIG ALGLPIGVYL PHFYAGPMGL GLAAVGTIFM LARFWDVFTD
PAMGVLSDKF PSRWGRRRHW IVLSVPILML SAYMVFVPTA PVSSFYLLAW MFFLYIGWTL
LTLSHMAWAA ELSDDYNERS RIQGFREAFQ LLGVPLVLLL PAMIERMGPE NMEAARVASM
GWFIIIVLPI AIGLNLWLVP EKKAKPERHV SFIASVVPLF RNSPLRRLLA ADFLSGFAGT
ALASMYMYEA TLVWGVGSSA SLLLLLYFFG GIGFIPLVLK LSYYLGKHRT VVVAGLFNVC
FPPVIFLIPF GNVWVAAAVL FFLGVNVGTT TTLYRSMMAD VADLDELETG QKRTGLFYAL
LTLTQKIGGA VAVGVVFWTL ALIGFNPEGE NAPGAVQGLS YVFVAVPMIC NALVAAIIWF
YPIGLKEQAE LRRKLDERFV EEVEQTERVP NLP
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