Gene Plav_2594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2594 
Symbol 
ID5455509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2797294 
End bp2798016 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content63% 
IMG OID640878170 
Productphosphoglycerate mutase 
Protein accessionYP_001413859 
Protein GI154253035 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.440152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.139098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGCA CCGCTTTCGA CGGCTCGCGC CGCCGCCGCA TCTATCTGTT CCGCCATGGC 
GACGTTTCCT ATGTCGACGA CAAGGGGAAC CGGGTGGCGG ATGCCTCCGC CGTGCCGCTG
ACGGATTGGG GCCGCGAGCA GGCGACGCTG ACCGGCAAGG CGCTTCAGAA AATTCCGTTC
GACCGGGCGG TGACGTCGAG CTTTCCGCGT TCGGTGGAAA CGGCGCAGCT CATCCTTGAA
GGGCGCGGGC TCGAAATCGA GCCGCTGGAA CACTTCGTCG AGTTCCAGAG CAACAGTTCC
TTCCGAGACC AGATCAAGGA CCTGAACGAC ATCGCCTATT CGTTCCGCGA CGCGCACCTG
CCCGGCGCGC GCTACAATGG CGGTGACAGT TTCGAGGAAG TGAATACGCG CGTCGTCTCC
GCGCTTGAAG AGGTGATCGC CGAACCCGAA TGGGAGACGC TCGCCCTCGT CGCGCATGGC
GGCATCAACC GCCTGGTGAT CGGCTGGGCG CTTGGCTCCG GCCTCTCGAC CTTTGCCGCG
ATCGACCAGA ACACCTGCTG CGTCAACGTC ATCGACTTCG ACGAGCACCC GGAGACGAGA
CAGATCGTCC GCAAGACGCT CCGGGCACTG AACGTCACGG TCTATGACGT CGTGAAAGAA
GGCAACCACC TCTTCTCGCT CGAACAGATC GCGGCACGGC TGAAGGTGAA GGAAGCCGTC
TGA
 
Protein sequence
MLRTAFDGSR RRRIYLFRHG DVSYVDDKGN RVADASAVPL TDWGREQATL TGKALQKIPF 
DRAVTSSFPR SVETAQLILE GRGLEIEPLE HFVEFQSNSS FRDQIKDLND IAYSFRDAHL
PGARYNGGDS FEEVNTRVVS ALEEVIAEPE WETLALVAHG GINRLVIGWA LGSGLSTFAA
IDQNTCCVNV IDFDEHPETR QIVRKTLRAL NVTVYDVVKE GNHLFSLEQI AARLKVKEAV