| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2570 |
|---|
| Symbol | |
|---|
| ID | 5454168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 2772324 |
|---|
| End bp | 2772752 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640878147 |
|---|
| Product | flagellar basal-body rod protein FlgB |
|---|
| Protein accession | YP_001413836 |
|---|
| Protein GI | 154253012 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1815] Flagellar basal body protein |
|---|
| TIGRFAM ID | [TIGR01396] flagellar basal-body rod protein FlgB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.15376 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATCG GCGATCTTCC CATCTTCGAC ATGATGAAGC AGCGGCTGCA CTGGCTGACA
GCGCGCCAGC AGGTGCTTGC GCAGAACGTC GCCAATTCCG ACACGCCGGG CTATGCCGCG
AAGGATCTGA AGGAACTCGA TTTCGGCGCG CTGGTGAAGC GCAGCGGCCC CTCATTGACG
CCGGTAGCGA CGCAGGGCGG ACATATCGGC AGCCCGGTTT CCGGCCATGG CAATTTTTTC
CGTCCGGGGC AGTCCACGGG CGGGCAGGTG GTGAAGAAGG CGGATTTCGA AACCTCGCCG
AGCGGCAATT CGGTCGTGCT TGAAGAACAG ATGATCAAGG TCGCCGAGAC GCAGATGGAT
TACCAGACCG TGACGGGGCT CTATTCGAAG AGCCTCGGCC TCATCAGGAT CGCGCTCGGC
CGTAGCTGA
|
|---|
| Protein sequence | MAIGDLPIFD MMKQRLHWLT ARQQVLAQNV ANSDTPGYAA KDLKELDFGA LVKRSGPSLT
PVATQGGHIG SPVSGHGNFF RPGQSTGGQV VKKADFETSP SGNSVVLEEQ MIKVAETQMD
YQTVTGLYSK SLGLIRIALG RS
|
|---|
| |