| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2506 |
|---|
| Symbol | |
|---|
| ID | 5454496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 2707390 |
|---|
| End bp | 2707857 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640878083 |
|---|
| Product | glyoxalase/bleomycin resistance protein/dioxygenase |
|---|
| Protein accession | YP_001413772 |
|---|
| Protein GI | 154252948 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2764] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.0244089 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGGA AGACAGAAAG CGGGGCGCCG CACATCGTGC CCGCACTTTT CTACAAGGAT
CCGAACGCCG CTCTCGACTG GCTCGAAAAG GCGTTCGGAT TTGAGATCGC GCTCCGCATC
ACGGATGATG ACGGCGTCAT CCAGCATGCG GAAATGGAAT ATGGCAATGG CCGCGTCATG
ATTGGCGGCG TCGACTGGGC CGAATGGCCG GCAAGCCCGA AGGCCATAGG CGGCAAGAAC
ACCCAGTGCA TTCATGTGCA GGTGAAGGAC GTCATGGCGC ATTTCAAGCG CGCGAAGGAT
GCGGGCGCGA ATATTGCTGC CGAACCGCAA GACCAGTTCT ATGGCGACAA GGTCTACCGC
GTCTTCGATC CCGAAGGCCA TTTCTGGACC TTCGGACAGT CGATGCGCGT CCTCTCCAAC
GAGGAGATGG AAAAAGCGTC CGGCCTTAAG GTCGAAGGCA AGGGATGA
|
|---|
| Protein sequence | MAGKTESGAP HIVPALFYKD PNAALDWLEK AFGFEIALRI TDDDGVIQHA EMEYGNGRVM
IGGVDWAEWP ASPKAIGGKN TQCIHVQVKD VMAHFKRAKD AGANIAAEPQ DQFYGDKVYR
VFDPEGHFWT FGQSMRVLSN EEMEKASGLK VEGKG
|
|---|
| |