Gene Plav_2472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2472 
Symbol 
ID5453957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2673897 
End bp2674340 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content64% 
IMG OID640878048 
ProductMarR family transcriptional regulator 
Protein accessionYP_001413738 
Protein GI154252914 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.161606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.735248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAAT CCGCCGGCCG AACGCTTCCC GATGTGGGCA AGCAGCTTTC CTTCGCTCTT 
TACGGCGCCG CCAATCGCCT TGTCCGGATG CACAAGCCGT TTCTCGACCC GTTGGGACTG
ACCTTCCCCC AATACCTCGT GATGCTTGAG CTTCTCGGTT CCGGCCCACG CTCTGTCGGC
GAGTTGGGAA CGAAACTTGG CATGGATACA GGGACGATCA CGCCGCTGGT GAAGCGTCTG
GAACAGGGTG GCTTCGTTTC CCGCCGCCGC GACGCCAAGG ACGAACGGCG GGTACTCGTC
GACCTCACAG CTTCGGGCGA AGCCATGCGC GAGCGAATCC GGGTGGTGCC GGACCGGATC
AAGACCGCCT GCCAGATCCC CGACGACAGG GCCGATGAGC TGCGCGACGT GTTGAACGGC
ATCGGCCGGT CGGACGAGGA CTGA
 
Protein sequence
MPKSAGRTLP DVGKQLSFAL YGAANRLVRM HKPFLDPLGL TFPQYLVMLE LLGSGPRSVG 
ELGTKLGMDT GTITPLVKRL EQGGFVSRRR DAKDERRVLV DLTASGEAMR ERIRVVPDRI
KTACQIPDDR ADELRDVLNG IGRSDED