| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2448 |
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| Symbol | |
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| ID | 5453990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2651704 |
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| End bp | 2652498 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640878024 |
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| Product | thymidylate synthase |
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| Protein accession | YP_001413714 |
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| Protein GI | 154252890 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0207] Thymidylate synthase |
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| TIGRFAM ID | [TIGR03284] thymidylate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.848435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.156064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCAAT ATCTCGATCT CATGCGCCTC GCTCGCGACA CGGGCGTAAC CAAGACCGAC
CGCACGGGCA CGGGCACGCG CAGCATATTC GGCCATCAGA TGCGCTTCGA TCTTTCGGAG
GGCTTTCCCC TCGTCACGAC GAAAAAGCTG CACCTGAAGT CGATCATCCA TGAGCTGCTC
TGGTTCATCG CGGGCGACAC GAACACCCGC TATCTGAAGG CGAACGGCGT CAGCATCTGG
GACGACTGGG CGGATGAGAA TGGCGAGCTC GGCCCCGTTT ATGGTCATCA GTGGCGGTCA
TGGCCGACGC CGGACGGTGG CAAGATCGAC CAGATCAGGA ATCTCGTCGA GCAGATCAAG
ACAAATCCGG ATTCGCGGCG GCTCATCGTC TCGGCATGGA ATGTCGCGGA TGTGGACAGC
ATGGCGCTGC CGCCGTGCCA CTGCCTGTTC CAGTTCTATG TGGCGGAGGG CAAGCTCTCC
TGCCAGCTCT ATCAGCGTTC GGCGGACATC TTCCTCGGCG TGCCGTTCAA CATCGCGTCC
TATGCGCTGC TCACCATGAT GGTGGCGCAG GTGACGGGGC TGAAGCCGGG CGAATTCATC
CACACCTTCG GCGATGCTCA TCTTTATCTC AATCATCTGG AGCAGGCGGA CAAGCAGCTC
GCGCGCGAGC CGAAAAAGCT GCCGGTCATG CATATCAATC CGGACGTGAA GAGCCTCTTC
GACTTCACCT ATGACGACTT CACGCTCGAA GGCTACGAGG CGCATCCGCA TATTTCCGCG
CCCGTCGCCG TCTGA
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| Protein sequence | MQQYLDLMRL ARDTGVTKTD RTGTGTRSIF GHQMRFDLSE GFPLVTTKKL HLKSIIHELL
WFIAGDTNTR YLKANGVSIW DDWADENGEL GPVYGHQWRS WPTPDGGKID QIRNLVEQIK
TNPDSRRLIV SAWNVADVDS MALPPCHCLF QFYVAEGKLS CQLYQRSADI FLGVPFNIAS
YALLTMMVAQ VTGLKPGEFI HTFGDAHLYL NHLEQADKQL AREPKKLPVM HINPDVKSLF
DFTYDDFTLE GYEAHPHISA PVAV
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