Gene Plav_2411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2411 
Symbol 
ID5455106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2601975 
End bp2602937 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content62% 
IMG OID640877986 
Productalcohol dehydrogenase 
Protein accessionYP_001413677 
Protein GI154252853 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCTG CGGTCTATTA CGAGAACGGT CCGCCGAGCG TATTGAAATA CGAGGACGTG 
CCCGACCCCG AATGCCTGCC TCAGGGCATC GTCATCAAGG TCGAAGCCGT CAGCATCGAA
GGCGGCGATA CGCTGAACCG CGCGCGCGGC GAACTCGCCT CGAAGCCCCA CATCGTCGGC
TACCAGGCGG CCGGCACGAT CGTCGAAGTC GGCGCCGAGG TCACGCATCT GAAGCCCGGC
CAGCGCGTCA CCACCGTCAA CATGCACGGC TCTCACGCGG AACTGCGCTC GGTCTTCGCC
CGCACCGCAT GGGTCGTCCC CGACAACATG GACATTCGTG AAGCGGCGGC GATTCCCGTC
CCCTTCGGCA CGGCACATGA TTGCCTCTTC GAATTCGGAC GCCTGCAGCC CGGCGAAACC
GTTCTCGTGC AGGCAGGCGC CGGAGCCGTC GGCCTGGCCG CGATCCAGAT CGCAAAAAGA
GCCGGCGCCA CCGTCATCGC AACGGCATCG AGCGACGAAC GGCTCGAAAG CCTGAAGAAA
TACGGCATGG ACCACGGTAT CAACTACAAG ACGCAGGACC TGGTCGCCGA AGCAAAACGC
CTCACCGACA ATCGCGGCGT GAACCTCGTC GTCGATCCCG TCGGCGGCTC GACCCTCCAG
AAGTCGATCC TCGCCCTTGG CTATCGGGGC CGCATCTCGA TGGTCGGCAA TGCCGGCCGC
GAAGAAATGC GCGTCGACGT CTCAACCATG ATGGGCGGCA ATCAGTCCCT GTCCGGCGTC
TTCCTTGGCG CCGAAATTTT CAGCGACCGC GTGCACGACA ACATCCAGAA ACTGATCGAC
GACATTGCAA AGGGCGAACT GAAAGTCGTC CTCGACAAGT CCTTTCCGTT GAAGGAAGCC
GCCGCCGCTC ATGAATATAT CGAGAGCCGT CAGGCTATCG GACGCGTCAC ATTGATCCCT
TAA
 
Protein sequence
MKAAVYYENG PPSVLKYEDV PDPECLPQGI VIKVEAVSIE GGDTLNRARG ELASKPHIVG 
YQAAGTIVEV GAEVTHLKPG QRVTTVNMHG SHAELRSVFA RTAWVVPDNM DIREAAAIPV
PFGTAHDCLF EFGRLQPGET VLVQAGAGAV GLAAIQIAKR AGATVIATAS SDERLESLKK
YGMDHGINYK TQDLVAEAKR LTDNRGVNLV VDPVGGSTLQ KSILALGYRG RISMVGNAGR
EEMRVDVSTM MGGNQSLSGV FLGAEIFSDR VHDNIQKLID DIAKGELKVV LDKSFPLKEA
AAAHEYIESR QAIGRVTLIP