Gene Plav_2409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2409 
Symbol 
ID5455044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2600369 
End bp2601235 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content60% 
IMG OID640877984 
Producthypothetical protein 
Protein accessionYP_001413675 
Protein GI154252851 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.517139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCC TCCATCTGGG CTTCATGGTC CTCATCAACC TGATCTGGGG TTTCGCGCTC 
ATTGCGGCGA AGGTCTCGCT CGACCATTTT CCGCCGCTGC TCTTCGCGGC GTTGCGCTTC
ACGCTGATCG TGCTGGTGCT GTTTCCGTTC CTGAAGATAC ATCGTGGACG GATGAAAGAG
GTCATCATCA TCGCGCTTTG CGCGGGGCCT GTCGGGTTCG GTTTTTTCTT TGTCGGCCTT
GCGCTGTCCA ATGCCTCCGT CGTCGCCGTC ACCAGCCAGC TCGGCGTGCC TTTTGCCACC
ATCATGTCGA TCTTCTTCCT GAAGGAGCAG GTCCACTGGC GGCGCTGGCT CGGTATCTCG
CTCTCGTTCC TCGGCGTCAT GATCATCAGC TTCGATCCCG CCGTCTTCAC CTATATCGAC
GGACTTCTGT TCGTCGTCGC TTCCGCCCTG GTCGGCTCGG TCAGCACCAT CTTCCAGCGC
CAGTTGAAGA ATGTCGGCGT TTTCGAGTTG CAGGCATGGA TCGCGATTGC GGCGGCGCCC
CTCATGCTCG GCGCCTCGGC GATCTTTGAG CGCGATCTCC TTGGGCTCGT TCTCACGGCC
GATCTGCTGG ATTGGGCGGG CGTCTTTTAC GTCGCCTTCG CGTCCAGCCT TGTCGGTCAT
GCGGGCATCT ACTACCTGCT GCAACGCTAC GAGGTGACGC AGACGGCGCC ACTCACGCTG
CTGTCGCCCG TGTTTACGGT GTTTTTCGCG GTTATGCTCC TTGGCGAAGT GCTCACGTCG
CGTATGCTGG TCGGCGCGCT GGTCGCCCTG ACCGGCGTTC TGATCGTGTC GATAAGACAG
AAGCGGATTG TGGCTACGGG ACCCTGA
 
Protein sequence
MTPLHLGFMV LINLIWGFAL IAAKVSLDHF PPLLFAALRF TLIVLVLFPF LKIHRGRMKE 
VIIIALCAGP VGFGFFFVGL ALSNASVVAV TSQLGVPFAT IMSIFFLKEQ VHWRRWLGIS
LSFLGVMIIS FDPAVFTYID GLLFVVASAL VGSVSTIFQR QLKNVGVFEL QAWIAIAAAP
LMLGASAIFE RDLLGLVLTA DLLDWAGVFY VAFASSLVGH AGIYYLLQRY EVTQTAPLTL
LSPVFTVFFA VMLLGEVLTS RMLVGALVAL TGVLIVSIRQ KRIVATGP