Gene Plav_2386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2386 
Symbol 
ID5456367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2575704 
End bp2577053 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content63% 
IMG OID640877962 
Producthypothetical protein 
Protein accessionYP_001413653 
Protein GI154252829 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.164497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.439216 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCGG TAGCGTTTGC CCTTTTGCTC GTGGCGTTTC CCGATGCGGT GAAGGCTGCC 
TGCGGCACCG GCTTCATGAA GTTGCGCTTT GACGAAGACC CGTCCTGCTT TCGGACAGAA
GCGCCAGGAG ACGCTCTCGA CCGGCTCAAA TTCATGCCCC TGGATCGGGA CGGAGACGTC
TGGCTGGGAA TGGGCGGTGA AATCCGTCAG CGCTATGAAT ATACAAATAA CCCGGCCTTC
GGCGCTGCCC GCCAGGACAA GGCCGGCGTC TGGCTGCAGC GCTACGTCCT TCACGGCGAC
CTGCATCTCG GCTCCCGTCT CCGCCTCTTC GGGCAGTTGA GCAGCGCGCT GGAGAGCGGG
CGGGCAGGGG GCGGAAGTCC TGTCGACGAA AACCGGCTGG AGATACAGAA CGCCTTTGCC
GATGTGACGC CGTTTCAGGT GCCTCTCACA TTGCGTGCCG GCCGTCAGGA ACTTCAGTTC
GGCTCGGGCC GTCTCGTCGA TGTCCGCGAA GGCCCGAATG TACGCCGCAG CTTCGACGGT
ATTCGCGCCT TCGTCGCGGC GGGCGGCTGG CGCGTGGATG CCCTTGCCGT TCGTCCGCGC
CTGTCGCGAC CGGGCGCTTT CGACGACAAG ACCAATCATG GCCAGTCGCT CTGGGGCCTT
TATGCGGCAG GGCCCGGTCT CGATCTCTAT TATCTCGGAT TCCAGAGCGA TGCGTCGGTC
TTCGTGCAGG GAACGGCGAA GGAGCATCGC CATTCCATCG GCGCGCGCTT GTGGGGCGCG
CGCGACGGCT GGGACTGGAA CCTGGAATCT CTCTACCAGT TCGGCAGCTT CGGAGCAGGC
GATATAAGCG CATGGACGGT GGCGAGCGAG ACCGGCTACC GCTGGGAGAC CGCGGCATGG
CAGCCGCGCG TCGCCCTCAG TGCCAATATT GCCAGCGGTG ATGACGATCC GGCGGATGGC
GACCTCGGCA CCTTCAGCCC ACTGTTCCCG CGCGGCAATT ACTTCTCGGA AGCGGCTGTT
CTCGGCCCGC GGAATTTCTA CAATCTCCAC GCCTTCCTCA CCGTCGAACC CGCGCAAGAC
TGGACGCTGA CGACGGATGT GAATTTCTTC TGGCGCCTCG AGACGGAAGA TGGCGTCTAT
ACGCCGGGCG GCAGTCTTCT GCGCGGACCC GGCGGCAGCG ATGAACGCTT CGTCGGCTCG
GCATTTTCCC TTTCATCGAG CCACACGCTC TCGCAACGGA TCGACGCCAC GGCGATCTAC
ACGCATTTCT CCGCGGGGGA TTTCCTGGAA TCGACCGGCT CGTCCGCCGA TATCGATTTT
CTGGAGCTGA CGTTGCGCTT CCGGTTCTGA
 
Protein sequence
MRAVAFALLL VAFPDAVKAA CGTGFMKLRF DEDPSCFRTE APGDALDRLK FMPLDRDGDV 
WLGMGGEIRQ RYEYTNNPAF GAARQDKAGV WLQRYVLHGD LHLGSRLRLF GQLSSALESG
RAGGGSPVDE NRLEIQNAFA DVTPFQVPLT LRAGRQELQF GSGRLVDVRE GPNVRRSFDG
IRAFVAAGGW RVDALAVRPR LSRPGAFDDK TNHGQSLWGL YAAGPGLDLY YLGFQSDASV
FVQGTAKEHR HSIGARLWGA RDGWDWNLES LYQFGSFGAG DISAWTVASE TGYRWETAAW
QPRVALSANI ASGDDDPADG DLGTFSPLFP RGNYFSEAAV LGPRNFYNLH AFLTVEPAQD
WTLTTDVNFF WRLETEDGVY TPGGSLLRGP GGSDERFVGS AFSLSSSHTL SQRIDATAIY
THFSAGDFLE STGSSADIDF LELTLRFRF