Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2380 |
Symbol | |
ID | 5456638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2569723 |
End bp | 2570349 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640877956 |
Product | response regulator receiver protein |
Protein accession | YP_001413647 |
Protein GI | 154252823 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGACA CCGAGGTCTG CGTTCTGATC ATCGACGACG ACCTGGCGAT GAGGGAGTCG CTCGAAAGCC TGTTTCGATC GCTCGGGCAT GAGGCACGTG CGTTTGCGAC GGGCCGGGAG CTTGTGGAAA GCGACCTGCC GGACATGCCG AGTTGCCTCG TCCTCGACGT AAGACTGCCG GGGGCGAGCG GGCTCGAGTT GCAGCTCGAG CTCCTGCGTC TCGGGTTCGA TCTGCCGATT GTGTTCATCA CCGGTCATGG CGACGTGCCG ATGTCGGTCG CGGCGATGAA GGCTGGTGCC ATCGAATTTC TGACCAAGCC TTTTCGCGAG CAGGAGCTTA TCGACGCCGT TCACCGGGGC GTCGAGATCG ACCGGGAGCG CCGCGCGGCC TTGACATCGC TCGCCGAGCT GCGCAGCCGG TTCGAGACGC TGACCCCTCG CGAGCGCGAG ATTATCGCTC TCGTGGTGAC CGGGCAGATG AACAAGCAGA TTGCCGCCGA GCTCAACCTG AGTGAAGTGA CCGTCAAGGT TCATCGCGCC CAGGTGATGC GCAAGATGCA GGCAAAGACG CTTCCCGATC TCGTGCGATA TGCAGACCGG CTCCTCACGG ATACCTCAAA GCCGTAG
|
Protein sequence | MSDTEVCVLI IDDDLAMRES LESLFRSLGH EARAFATGRE LVESDLPDMP SCLVLDVRLP GASGLELQLE LLRLGFDLPI VFITGHGDVP MSVAAMKAGA IEFLTKPFRE QELIDAVHRG VEIDRERRAA LTSLAELRSR FETLTPRERE IIALVVTGQM NKQIAAELNL SEVTVKVHRA QVMRKMQAKT LPDLVRYADR LLTDTSKP
|
| |