Gene Plav_2380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2380 
Symbol 
ID5456638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2569723 
End bp2570349 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content63% 
IMG OID640877956 
Productresponse regulator receiver protein 
Protein accessionYP_001413647 
Protein GI154252823 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CCGAGGTCTG CGTTCTGATC ATCGACGACG ACCTGGCGAT GAGGGAGTCG 
CTCGAAAGCC TGTTTCGATC GCTCGGGCAT GAGGCACGTG CGTTTGCGAC GGGCCGGGAG
CTTGTGGAAA GCGACCTGCC GGACATGCCG AGTTGCCTCG TCCTCGACGT AAGACTGCCG
GGGGCGAGCG GGCTCGAGTT GCAGCTCGAG CTCCTGCGTC TCGGGTTCGA TCTGCCGATT
GTGTTCATCA CCGGTCATGG CGACGTGCCG ATGTCGGTCG CGGCGATGAA GGCTGGTGCC
ATCGAATTTC TGACCAAGCC TTTTCGCGAG CAGGAGCTTA TCGACGCCGT TCACCGGGGC
GTCGAGATCG ACCGGGAGCG CCGCGCGGCC TTGACATCGC TCGCCGAGCT GCGCAGCCGG
TTCGAGACGC TGACCCCTCG CGAGCGCGAG ATTATCGCTC TCGTGGTGAC CGGGCAGATG
AACAAGCAGA TTGCCGCCGA GCTCAACCTG AGTGAAGTGA CCGTCAAGGT TCATCGCGCC
CAGGTGATGC GCAAGATGCA GGCAAAGACG CTTCCCGATC TCGTGCGATA TGCAGACCGG
CTCCTCACGG ATACCTCAAA GCCGTAG
 
Protein sequence
MSDTEVCVLI IDDDLAMRES LESLFRSLGH EARAFATGRE LVESDLPDMP SCLVLDVRLP 
GASGLELQLE LLRLGFDLPI VFITGHGDVP MSVAAMKAGA IEFLTKPFRE QELIDAVHRG
VEIDRERRAA LTSLAELRSR FETLTPRERE IIALVVTGQM NKQIAAELNL SEVTVKVHRA
QVMRKMQAKT LPDLVRYADR LLTDTSKP