| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2378 |
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| Symbol | |
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| ID | 5454680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2567526 |
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| End bp | 2567981 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640877954 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_001413645 |
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| Protein GI | 154252821 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGAAAG CAGCCGGATC TATCGAAAAG AAGCCCGCCT ATCACGGCGC ACCCTGGGAA
GAGGCATTCG GATACGCGCA AGCCGTTCAG GCCGGGCGCA CGATCTACGT ATCCGGCCAA
CTCAGTCATG ACGAGACCGG CAACTTCATC GGAGCTGCCC CGGTTAATTC CAACGGCGAG
ATTCTGGATT CCTCGAACAT GGAACTTCAG ATGCGCATAA CCTACGAAAA TGCTTCCAAG
ATTCTCGCGA AACTGGGAGC CACACTCGAT CATGTCGTCG AAGAGACGAT ATTCGTGACA
GACATGGCTG CGGCCTTCGC CATTTCCGGG AAGGTGCGCA AGGCGGCCTA CGCCACCGAC
CGGCCAGCAT GCGCAAGCAC CATCGTGGCG ATATCGGGCC TTGCGCTTCC CGGACAACTT
GTCGAGATCA GTTTCACAGC GGTCTTGCCC GAGTAG
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| Protein sequence | MTKAAGSIEK KPAYHGAPWE EAFGYAQAVQ AGRTIYVSGQ LSHDETGNFI GAAPVNSNGE
ILDSSNMELQ MRITYENASK ILAKLGATLD HVVEETIFVT DMAAAFAISG KVRKAAYATD
RPACASTIVA ISGLALPGQL VEISFTAVLP E
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