| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2362 |
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| Symbol | |
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| ID | 5455350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2550255 |
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| End bp | 2551004 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877940 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001413631 |
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| Protein GI | 154252807 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.876035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAACC TGAAGGGAAA GGTCGCCGTA GTCACCGGCG GCAATAGCGG AATCGGCAAG
GCAACGGCGC GGCTGTTTGC CGAGCGGGGC GCACAGGTCG TCATCACGGG TCGCCGGCGG
GACGCAGTAC AGACCGCCGC AGCGGAGATC GGGTATGGCG TCATAGGACT GACCGGTGAT
GTCGCGGAAC TGGACCATCA CGCACGCCTG GTAGAGGAAA TCCGGCGACG CTTTGGTGGC
CTCGACATTT TCGTGGCCAA TGCTGGCGTC ATCAGCCTCG CGGCAACCCC CGATGTAACG
GTCGCCGACT ACGATCGGCA GTTTGCGGTC AATACACGAG GTACCTTCTT CGGCGTACAG
GCGCTGCTGC CGCTCTTGCG CGACGGCGGC AGCATCGTGC TGGTGGGCTC TCTTGCAGCC
ACGAAAGTCC TCGAAAACCA CGCCGTCTAT GCCGGAACGA AGGCGGCGCT CGCAGCCTTC
GCTCGCAACT GGGCGCTCGA GCTGAAAGCA CGGCGTATCC GCGTGAATGT TCTCAGTCCG
GGACCAGTGG ATACGCCAGT CGTGACCAAG TTGGGCGTGT CCGACGCGGA CAGACCCGCC
TTTCTGGAGG CTATGGGCGA GAAGATTCCT GCCGGCCGCT TCGGCGACGT CAGGGAGCTC
GCGCGTGCCG CGCTGTTTCT GGTGTCGGAC GAGAGCAGCT TCGTCAATGG AACAGAGCTG
CATGTCGATG GCGGGATGTC GTTGACCTGA
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| Protein sequence | MENLKGKVAV VTGGNSGIGK ATARLFAERG AQVVITGRRR DAVQTAAAEI GYGVIGLTGD
VAELDHHARL VEEIRRRFGG LDIFVANAGV ISLAATPDVT VADYDRQFAV NTRGTFFGVQ
ALLPLLRDGG SIVLVGSLAA TKVLENHAVY AGTKAALAAF ARNWALELKA RRIRVNVLSP
GPVDTPVVTK LGVSDADRPA FLEAMGEKIP AGRFGDVREL ARAALFLVSD ESSFVNGTEL
HVDGGMSLT
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