Gene Plav_2357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2357 
Symbol 
ID5455516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2544513 
End bp2544902 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content55% 
IMG OID640877935 
Productresponse regulator receiver protein 
Protein accessionYP_001413626 
Protein GI154252802 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.274737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.453516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAAGG CAAATCCCAG CGTCGCTATC GTTGATGACG ATCCGAGGCT GCTTGAGTCG 
ATGGAGAACC TGTTGGAATC CGCCGGATAT GTTCCCCACA GCTTTTCATC GGCGGAAGCG
TTTATCGTCA GCGGGCTGTC GAACATGGAC GTTCTTATCA CCGATATCGG CATGCCGGGA
ATGAATGGTT TTGAACTTCG CGACCTCATG AAAAGAACGC GACCGGAGCT ACCGGTGTTC
CTCATCACCG GACGGCACGA AAATGTCGAA CAGGGTCGAA CCATGGGCGC AAGCGGATTC
TTCCGCAAAC CCTTCGATGC CCGCGCCTTG CTTGCGGCTG TCGAAAGGGT CTTGGACGAT
CGAAACAAGG AGGGTGAACA TGAGGCTTGA
 
Protein sequence
MKKANPSVAI VDDDPRLLES MENLLESAGY VPHSFSSAEA FIVSGLSNMD VLITDIGMPG 
MNGFELRDLM KRTRPELPVF LITGRHENVE QGRTMGASGF FRKPFDARAL LAAVERVLDD
RNKEGEHEA