| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2352 |
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| Symbol | |
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| ID | 5455656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2536380 |
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| End bp | 2538545 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640877930 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001413621 |
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| Protein GI | 154252797 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.109072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTATCTCA GACTTTCCGT TGGCGACATC GTCTCCTGCC TCAAGGGCGA CTACGAACTC
AAACAAGTCA TGCCCGATGG TCATCTCGTG CTACAGAAGC AATTCGGGCA TGAGAGCATT
TTCATGTCGC AGGATGAGCT TCTCAAGCAA CACGCGGAAC GACAGCTCAG GGTGTCGAGA
CGTATCGATT ATTGGCGTGA CAGGGCAGCG TCGCTCAAGG CATACACGCC TCGTGACCCC
AATGTTGAAC TTGGCCCGAA AGCAAAGATC CGTCAGCTAC TGCTTGTCCA GTACGACAAG
TCGCCCGTTG CGCTCTCCGA CAAATCGCTG AAGGCGTTCA TTCGAGACGC CGACCTGCCG
AAGGAACTTG AGGCCGCTGG CTGGCGACCG AGTGCGGGCA CATTCAGGAG AGACATTAGA
AACAGAACCG AGAATGGCCT GAGACCACTC GCGATCATGG GCCGGCGGAG AAAACGCTCT
TCCTCTGCCC GCATGTCCGA CGAAGTGTCG AGGCTGCTTA TCAAATGCGT CCATTGGTAC
TATGCGGCGC GGAACAGAAC CGTTTGCGAA GCCTACGACC GCCTCAAGAT CGTGGTTGAT
GAGCTCAATC TGCGTGCTCG GCGATACGGT CGCATTTCCA GACTGACATG CCCGAGCCAT
GAGACTGTCC GCAACTGGAT CAGGCGCTGC GAGAACTACG ATTTCTACAA GAAGAAATTC
GGAGAAAAAG AAGCGCGGCG GCGCTACTCC GGAGCCGGCT CCGGGCGGGA GGCAAAGCGA
CCACTTGACG TCGTGATGAT CGACGCGACG CCCATGGATG CGTTTGTCAT CGTTGATCCG
GATACGGGTA ACGTACTTGG GCGCCCGACG CTTCTGGTTG CAATCGATGT ATGCACCAGG
ATGATCCTGG GGACATTCAT CACTTTCGAG CCACCGAGCA TCTACTCGGT CATGAACTGC
ATCAAGAATG CACTGACTTG GAAGAAAGAA CTTGTCGCCC AGAAGTTTCC TGACCTCCGG
AAGCCATTCG TTGCGTTTGG TTGCCCTAGA CTCATCATAC TGGATAACGG TCTCGAAAAT
GTCGGCTCCT CAATGCAGGA CGCACTGCGC GACCTTGGTA TTGACGTCGA ATGGGCACCC
ATCAAGACGC CGGAATTCAA AACCTATGTC GAGCGATTCT TCGGTACTCT GAACAAGGGG
CTTCTACACA AGTTGCCGGG AGGTGTGTCG GCGCCGCCCA AGCAGCTGCG TGAACAAGGC
ATCGATCCGC GCAAGCAAGC ATGCATGACG CTTGATCGTC TTGAGGAACT CGTTCTCCAG
TTCATTCTGG AGGTCTATCA GTGCCGACCT CATCGAGGTA TCGACGACAT ACCCCTCATG
CGTTGGGAAG AGTTGACCAG GAAATACGGC ATCGACTTTA TTGATGATCT GAGGCGTATC
GATGACGCAT GCGGATACGT CAAGAATGCG ACTTTGACGC GTGACGGCAT AAAGGTGGAG
GGGCTCAGGT TTCACGACAG GGATATCGTT ACGGGACTCC TTGCCGACCT GCTGCCAGCG
GCTCCGCGTG GAAGACGACG GAAGGCATCC AACAGCGTCC CCGTCAAGAT AAAGCTCGAT
CCAGGGGATA TTTCGGAGAT CCGGGTATGG AACTCCGTCA CTAGCTCCTA TCAACCTCTA
CCGAACGAGC AGCAACGCTA TAGCCGGGGC ACGTCTCTCT GGTTCCACCG GCACCTCAAG
AAAGTGGCGC TACAGAAACA AGAAGGATTC ATTTCCGAAG ATGAGCGACT GAAAGCTCGC
AGGCGGCTGG TCAAGTCGAT TGAGAACGCT GGCATGATCG ACAAGTGCAA ACGGAGTCGT
TTGGTGAGCC AGATCTCGTC TTCGTCCTCG GTGGAGATCA GCTATGCGCC TCCTCGCCAC
GATGGCAACG CCACAACGGT GGAGGTTTCG CCGGGCATGG AGAATCGCGC GGATGGTGGA
GAAAAGCCCG CCGGCTTCCT GAGGGGAAGG GCTGCTCAAG CGAGAGCTAA GAAGAAGCGC
GAGAAATCGG ACGCGCCTCG TCAAAAGGAT CCAGCCCAGG CGCCGTCAGA GGATCTGAAG
CTGGAAAATC CGCAGGCCTT CATGGCACAC ATCGGCAACT CTGATGGGTG GGACGACGAT
GCTTGA
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| Protein sequence | MYLRLSVGDI VSCLKGDYEL KQVMPDGHLV LQKQFGHESI FMSQDELLKQ HAERQLRVSR
RIDYWRDRAA SLKAYTPRDP NVELGPKAKI RQLLLVQYDK SPVALSDKSL KAFIRDADLP
KELEAAGWRP SAGTFRRDIR NRTENGLRPL AIMGRRRKRS SSARMSDEVS RLLIKCVHWY
YAARNRTVCE AYDRLKIVVD ELNLRARRYG RISRLTCPSH ETVRNWIRRC ENYDFYKKKF
GEKEARRRYS GAGSGREAKR PLDVVMIDAT PMDAFVIVDP DTGNVLGRPT LLVAIDVCTR
MILGTFITFE PPSIYSVMNC IKNALTWKKE LVAQKFPDLR KPFVAFGCPR LIILDNGLEN
VGSSMQDALR DLGIDVEWAP IKTPEFKTYV ERFFGTLNKG LLHKLPGGVS APPKQLREQG
IDPRKQACMT LDRLEELVLQ FILEVYQCRP HRGIDDIPLM RWEELTRKYG IDFIDDLRRI
DDACGYVKNA TLTRDGIKVE GLRFHDRDIV TGLLADLLPA APRGRRRKAS NSVPVKIKLD
PGDISEIRVW NSVTSSYQPL PNEQQRYSRG TSLWFHRHLK KVALQKQEGF ISEDERLKAR
RRLVKSIENA GMIDKCKRSR LVSQISSSSS VEISYAPPRH DGNATTVEVS PGMENRADGG
EKPAGFLRGR AAQARAKKKR EKSDAPRQKD PAQAPSEDLK LENPQAFMAH IGNSDGWDDD
A
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