| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2348 |
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| Symbol | |
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| ID | 5456139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2531428 |
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| End bp | 2532945 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640877926 |
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| Product | type I restriction-modification system, M subunit |
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| Protein accession | YP_001413617 |
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| Protein GI | 154252793 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.427504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.00993981 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGATC AACTGACGCA GCAGCAAGTC AACCAGACGG CGTGGGCGGC GTGCGATACG
TTCCGTGGCG TTGTCGATGC CGGTCAGTAC AAGGACTACA TCCTTGTCAT GCTGTTCCTG
AAGTATATCA GCGATCTCTG GAACGATCAT GTGGAGGTCT ACCGCAAGCA GTTTGGAGAG
GACGAAGCTC GTATCCGCCG GCGCCTGGAA CGCGAGCGCT TCATTCTCCC CGAAGGCACC
AGCTTCTATG ACCTCCATGC TCAGCGTACC GAAGCGAATA TTGGCGAACT GATCAACATA
GCGCTCGAGA AGATAGAAGA CGCGAACCGG GCCAAGCTCG AAGGCGTGTT CCGCAATATC
GACTTCAATT CGGAAGCCAA TCTCGGGCGG GTGAAGGATC GCAACCGGCG CCTGAAGAAC
ATGCTCGAGG ATTTCGCGAA GCCGGCGCTG GACCTGCGCC CCAGCCGGGT GACCGAGGAC
ATTATCGGCG AGTGTTACAT CTATCTGATC TCACGCTTTG CCTCGGACGC AGGCAAGAAG
GCCGGCGAGT TCTACACGCC CTCCGCTATC TCCCGCCTGC TGGCGAAGCT GGCAGCCCCC
AAGCCGGGCG ACACGATCTG CGACCCGGCT TGCGGCTCCG GATCGCTGCT GATCCGGGCG
GCGGAGGAGG TCGGATCCGA GAACTTCGCC CTCTACGGCC AGGAAGTGAA CGGTGCCACC
TGGGCGCTGG CGCGGATGAA CATGTTTCTC CACGCCAAGG ACGCCGCGCG CATCGAGTGG
TGTGACACAC TCAACAGCCC CGCGCTGGTC GAGGGCGATC ACCTGATGAA GTTCGACGTA
GTGGTGGCCA ATCCCCCGTT CAGCCTCGAC AAGTGGGGGG CGGAGAACGC GGACACCGAC
CAGTTCAAGC GCTTCTGGCG CGGGATCCCG CCGAAGTCCA AGGGTGACTA CGGCTTCATC
ACCCACATGA TTGAGATCGC CAAGCGGCAG AGCGGCCGTG TCGCGGTGAT TGTACCGCAT
GGCGTTCTGT TCCGGGGAGG AGCCGAGGGG CGTATCCGCC AGGCGCTGAT CGAGGAGAAC
CTGCTCGACG CGGTGGTGGG GCTGCCCGCG AACCTGTTCA CGACCACGGG CATTCCGGTG
GCCATTCTGG TCTTCGACCG CTCCCGCGAA CAGGGCGGCG CGAACGAGGA CCGCCGCGAT
GTGCTGTTCA TCGATGCCAG CAAGGAATTC ACGCCCGGCA AAACCCAGAA CGTGATGGAT
GAGGCGCACA TCGCCAGGGT GCTGGAGGCA TACGCCTCGC GGGCCGAAAC TCCGAAATAC
TCCCACCGCG CCAGCCCCGA GGAGATCGCC GAGAACGACT TCAACCTCAA CATCCCCCGC
TATGTCGACA CCTTCGAGCC GGAGGAGGAA ATCGACGTCG CCGCCCTGCA GAAGCAGATC
AACACCATCG AGGCTGAGCT GGCCGAGGTA CGCGGCAAGA TGGCTGGCTA CTTGAAGGAG
CTGGGTGTTG ATGTCTGA
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| Protein sequence | MTDQLTQQQV NQTAWAACDT FRGVVDAGQY KDYILVMLFL KYISDLWNDH VEVYRKQFGE
DEARIRRRLE RERFILPEGT SFYDLHAQRT EANIGELINI ALEKIEDANR AKLEGVFRNI
DFNSEANLGR VKDRNRRLKN MLEDFAKPAL DLRPSRVTED IIGECYIYLI SRFASDAGKK
AGEFYTPSAI SRLLAKLAAP KPGDTICDPA CGSGSLLIRA AEEVGSENFA LYGQEVNGAT
WALARMNMFL HAKDAARIEW CDTLNSPALV EGDHLMKFDV VVANPPFSLD KWGAENADTD
QFKRFWRGIP PKSKGDYGFI THMIEIAKRQ SGRVAVIVPH GVLFRGGAEG RIRQALIEEN
LLDAVVGLPA NLFTTTGIPV AILVFDRSRE QGGANEDRRD VLFIDASKEF TPGKTQNVMD
EAHIARVLEA YASRAETPKY SHRASPEEIA ENDFNLNIPR YVDTFEPEEE IDVAALQKQI
NTIEAELAEV RGKMAGYLKE LGVDV
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