Gene Plav_2342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2342 
Symbol 
ID5456468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2523100 
End bp2524182 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content54% 
IMG OID640877920 
Producthypothetical protein 
Protein accessionYP_001413611 
Protein GI154252787 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.569523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0122307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGACTA AAACTCCAGA TGGTTCGATC CAAGACGCGA GCGGAAAGGT TATCTTCTTC 
AGCGCACAGC GCTTTGTCGA TGATATCTGT CTGGGGCATT GCTGCTTTAT CTGCGGCGCA
AAGCCTGGAT CGAAACCTTT TAATAATGAG CACATTCTGC CGGCCTGGCT GCTGCGGCGA
TTCAATTTGT TTGATCGTAC GATTACGCTC CCCTACGGCC ACAAGGTTCG CTACGGCACC
TACACTGTTC CCTGTTGTCA GGACTGTAAT AGCCTCATGG GCACGCAGAT CGAAACGCCG
ATCAGTGCAG CAATGGCTGG CGGCCTGTCG GCGATCAATG CGTTTGTGGA GGGTGGGGAC
CTCCTCAAAT TGTATGTATG GATGGGGCTG ATCTACCTAA AGACTCATTT GAAAGACCGC
GCCATGCGGA TTCATCTCGA TAAACGCGAG GGTGAAGAAA AGATCGGTGA CGACTACAAT
TGGGCAGACC TCCACCATAT TCACAGCGTC GTACGGAGTT TCTGCAACGG TTGCTTCGTC
GAGAAGGAGG CACTCGGTTC GTTCCTCACC ATATCGGTGA CCCATCAGGC CGGGCGTGAT
CGATTCGATT TTTCTGATCT TTATCTCGCG CAGACCATGG TGCTTTGCGT TGATGATTGC
GCGCTATTCG CCGTGTTCAA CGACTCTGGC GGTGCGCTCA GCCGTTTCTA TCCGCAGTTA
ACGCGCATCT CGGGTCCTCT GTCTCACATC CAAATGCGCG AAGTCATGGC AGAACTGGCC
TTTTTGAATT TGAGCCTAAA GGAGCGGCCA ACATTTCATA CTGAGTGCGA CATGGAGGCC
GAAACGAGCC GTATATTTGC GGTGAGACCG GAGTTGGACT TGGTACCAGT CGACTTGCGT
ATGCGCGGCC GTCTGCTCAG GCACGCGCTC TACAACGTGC CCGAGGGCAT GCAGTTCGCA
GGCGTCGCTC GGGAGGAAGC ACTGGCGGCA ATCGACGCCG GAACAATGAC ATTTCTGTTC
GACGACAACG GTGAGTTCAT CAAAGAATCG ATGACGTCGG AACTGCCTGT TCCAGAATCC
TAA
 
Protein sequence
MWTKTPDGSI QDASGKVIFF SAQRFVDDIC LGHCCFICGA KPGSKPFNNE HILPAWLLRR 
FNLFDRTITL PYGHKVRYGT YTVPCCQDCN SLMGTQIETP ISAAMAGGLS AINAFVEGGD
LLKLYVWMGL IYLKTHLKDR AMRIHLDKRE GEEKIGDDYN WADLHHIHSV VRSFCNGCFV
EKEALGSFLT ISVTHQAGRD RFDFSDLYLA QTMVLCVDDC ALFAVFNDSG GALSRFYPQL
TRISGPLSHI QMREVMAELA FLNLSLKERP TFHTECDMEA ETSRIFAVRP ELDLVPVDLR
MRGRLLRHAL YNVPEGMQFA GVAREEALAA IDAGTMTFLF DDNGEFIKES MTSELPVPES