Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2342 |
Symbol | |
ID | 5456468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2523100 |
End bp | 2524182 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640877920 |
Product | hypothetical protein |
Protein accession | YP_001413611 |
Protein GI | 154252787 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.569523 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.0122307 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGACTA AAACTCCAGA TGGTTCGATC CAAGACGCGA GCGGAAAGGT TATCTTCTTC AGCGCACAGC GCTTTGTCGA TGATATCTGT CTGGGGCATT GCTGCTTTAT CTGCGGCGCA AAGCCTGGAT CGAAACCTTT TAATAATGAG CACATTCTGC CGGCCTGGCT GCTGCGGCGA TTCAATTTGT TTGATCGTAC GATTACGCTC CCCTACGGCC ACAAGGTTCG CTACGGCACC TACACTGTTC CCTGTTGTCA GGACTGTAAT AGCCTCATGG GCACGCAGAT CGAAACGCCG ATCAGTGCAG CAATGGCTGG CGGCCTGTCG GCGATCAATG CGTTTGTGGA GGGTGGGGAC CTCCTCAAAT TGTATGTATG GATGGGGCTG ATCTACCTAA AGACTCATTT GAAAGACCGC GCCATGCGGA TTCATCTCGA TAAACGCGAG GGTGAAGAAA AGATCGGTGA CGACTACAAT TGGGCAGACC TCCACCATAT TCACAGCGTC GTACGGAGTT TCTGCAACGG TTGCTTCGTC GAGAAGGAGG CACTCGGTTC GTTCCTCACC ATATCGGTGA CCCATCAGGC CGGGCGTGAT CGATTCGATT TTTCTGATCT TTATCTCGCG CAGACCATGG TGCTTTGCGT TGATGATTGC GCGCTATTCG CCGTGTTCAA CGACTCTGGC GGTGCGCTCA GCCGTTTCTA TCCGCAGTTA ACGCGCATCT CGGGTCCTCT GTCTCACATC CAAATGCGCG AAGTCATGGC AGAACTGGCC TTTTTGAATT TGAGCCTAAA GGAGCGGCCA ACATTTCATA CTGAGTGCGA CATGGAGGCC GAAACGAGCC GTATATTTGC GGTGAGACCG GAGTTGGACT TGGTACCAGT CGACTTGCGT ATGCGCGGCC GTCTGCTCAG GCACGCGCTC TACAACGTGC CCGAGGGCAT GCAGTTCGCA GGCGTCGCTC GGGAGGAAGC ACTGGCGGCA ATCGACGCCG GAACAATGAC ATTTCTGTTC GACGACAACG GTGAGTTCAT CAAAGAATCG ATGACGTCGG AACTGCCTGT TCCAGAATCC TAA
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Protein sequence | MWTKTPDGSI QDASGKVIFF SAQRFVDDIC LGHCCFICGA KPGSKPFNNE HILPAWLLRR FNLFDRTITL PYGHKVRYGT YTVPCCQDCN SLMGTQIETP ISAAMAGGLS AINAFVEGGD LLKLYVWMGL IYLKTHLKDR AMRIHLDKRE GEEKIGDDYN WADLHHIHSV VRSFCNGCFV EKEALGSFLT ISVTHQAGRD RFDFSDLYLA QTMVLCVDDC ALFAVFNDSG GALSRFYPQL TRISGPLSHI QMREVMAELA FLNLSLKERP TFHTECDMEA ETSRIFAVRP ELDLVPVDLR MRGRLLRHAL YNVPEGMQFA GVAREEALAA IDAGTMTFLF DDNGEFIKES MTSELPVPES
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