Gene Plav_2337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2337 
Symbol 
ID5455978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2515462 
End bp2516151 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content59% 
IMG OID640877915 
Producthypothetical protein 
Protein accessionYP_001413606 
Protein GI154252782 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.000816667 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGACTGCGG ATCCTGTTGA GATCGTAAAA CTGCTCGGCC GATTTACCGG GCCGGATTTG 
ACGCGGACAT TATCGAGCAT CGAAGGCGCG GTGCGAGGCG TGTCGGCCGG CGATTGCACG
GGTTTTCTCG AAAATGTCGG GGCTGGCCGT GAGGTGTTGG CGGCCGCGGC CGGCATGAAA
CGACTTGCCG GACAGATCAA TGTCACGATC CACGCGCTCG GCATCCTCAT GTGCCTGCCA
CATATTCTCG AGCCGGACGA GCGCGTCCAA TCTGTGTCTC TCGGTGCGGG AAATACGGGC
CGCGATTTCG ATCTGGAGAC GAATGTTCGG GTCGCCGAGT TCAAATTCAT TCAGTGGAGA
GGCGGGCCAG AGACGATCCG TCAGAATTCG GTTTTCAAGG ATTACCTGCT GCTTGCGGAG
CATTCGACCG CGAAGCGCAA GCACCTCTAT TTGCTCGGAA CGGAGCATGC GATCAGGTTC
TTGCGAGGTG GTCGCGCCAT GTCGAGCGTC TTGAGCAGAA ACGCCAAGCT GCAGAGGATG
TTTACGGAGC GGTTCGGGGA GCGCTTCCGG ACGGTCGGCG ATTATTACGC GGCTCACGCC
AGCGCGGTTC AGATCGAGGA TGTTTCGCCC TGGCTTTCGG AATTGGCGGA GGAGTTGATC
GCGGAGCCGG ATATGGACGT AAGCGATTGA
 
Protein sequence
MTADPVEIVK LLGRFTGPDL TRTLSSIEGA VRGVSAGDCT GFLENVGAGR EVLAAAAGMK 
RLAGQINVTI HALGILMCLP HILEPDERVQ SVSLGAGNTG RDFDLETNVR VAEFKFIQWR
GGPETIRQNS VFKDYLLLAE HSTAKRKHLY LLGTEHAIRF LRGGRAMSSV LSRNAKLQRM
FTERFGERFR TVGDYYAAHA SAVQIEDVSP WLSELAEELI AEPDMDVSD