| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2307 |
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| Symbol | |
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| ID | 5453426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2473803 |
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| End bp | 2475599 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640877886 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001413578 |
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| Protein GI | 154252754 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.062343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGAT CGCCTTTCCT GCTCGCCATC GGCGCTTCAG CCGTTGCAGG CGCTGCCTTG
TTCGCGAGCG TTCCGCCGCA GGAGGCGAAG CCGTCGCAAG CCGAACTTGA AATATTGCTC
GATCCGCGGC TGGTCGCGCA GAACCAGTGC GGGCGCGGGA GCAGGGAGCG CGCGGCTTTC
TTCAAACCCT CATTTCAGCT GGCGCTGGCG GCCTCGGCGA GAGCGGCGAC GAACGCCGCC
GACGAAAAGC TGCCGCTCTG GCCGGGCCTC GGCGACCGTA CGGTCCGGAT CACGACCGCG
AGCGAAGAGG CGCAGATTTA TTTCGATCAG GGATTTGCAC TGCTTTACGG CTTCAATCAC
TGGGAGGCGA TCCGCGCGTT TCAGGAGGCG CAGCGGATCG ATCCCGGTTG CGCCATGTGC
TACTGGGGCG AGGCGAAGGC GCGCGGCCCC AACATCAATG CGCCGATGGA TGCGGGTGAG
GAAAATCCGG CGGTTGCCGC GATAAAAAAG GCGAAGGCGT TCGCGGGCAA GGCATCCGCG
AAAGAGCGGG CGCTGATCGA GGCGCTGGCG CTGCGCTACG TGGCGGATGG CGAAGAGACC
CGCGCGGAAC TCGACAAGCG TTATGCGGAG GCCATGGAAA AAATTCACAA GCGCTATCCC
GGCGACCAGG ACATTGCGGT CCTCTACGCA GAAGCGCAGA TGGATCTTTC GCCGTGGAAT
TACTGGGAGC GGGATCACAA GACGCCGAGG CCCCATATTG CCGGTGCGAT TGCAGCGGTG
GAAAGGGTTC TCGCCGCGAA CCCGAACCAT GCGGGCGCGA TCCATCTCCA GATTCATCTG
ATGGAAGCCT CCGCGATGCC GGAGCGGGCG GAGAAAGGCG CGGGGCGTCT CGCCGATCTG
ATGCCGGGGG CGGGGCATCT CGTCCATATG CCGGGCCATA TCTATTTCCG TGTCGGACGC
TATCTCGACT CGCTCGAAAC GAATGTGCGC GCGGTCGCGG TGGACGAAGC CTATCTGGCG
AAGACGGAGG GGTCCCCCAT CTATCGCTAC GGCTATTACC CGCACAACGT CCATTTCGTT
CTGGTCTCGG CGCAGATGGC GGGCGATGCG AAGACGGCGC TCGACTATGC GCGGAAGCTC
GACGGGCTTA TTCCCTTCGA AGCAGTGACT TCCGCTGCAA TCGTGCAGCC CGTCAAGGTC
GCGCCCTACT ATGCCTATCT CGAATTCGGA TCGGCGGATG ACATCGCCAA CATGCCGGAG
CCGCCGGACA ATCTTCCTTT CGTCAAGGGC ATATGGCGCT ATGTGCAGGG CGTGGCCGCT
GTGCGCGCGG GCGATCTCGC GGCGGCGCGA ACGGAAGCCG ATGCCATAGC GGCGCTTCGG
AGCGACGAAG CGCTGGCACC GCTCGCCGCC GCAAATGTGC CGGCGGGCAA CATTCTGCTT
CTCTCCGAAA CGGTGCTGCG CGCCCGTATC GACCAGCGCG AGGGCGCGCT CGATGCCGCG
CGCGCGAAGC TCGAAGAGGC GCTCGCGCTC CAGGACGGCC TCATCTATTC GGAGCCGCCT
TACTGGTACT ATCCGGTCGA GCAGACGCTT GGAGCGGTGT TGCTCGAAGC GGGCGACGCG
GACGCGGCGG TGGCACGGTT TCGCGCCGCG CTGGTTCGTC ACCCCAACAA TGCGTGGTCG
CTTTACGGGC TGATGAAGGC GCAGGAAGCC GCGGGCGACG GGGCGGTGAG CTATACGGCG
GAACTGCTGC GCAAGGCCGC GTTCGATCCG GGCGCCATCA CGCTCGACCG GCTGTAG
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| Protein sequence | MARSPFLLAI GASAVAGAAL FASVPPQEAK PSQAELEILL DPRLVAQNQC GRGSRERAAF
FKPSFQLALA ASARAATNAA DEKLPLWPGL GDRTVRITTA SEEAQIYFDQ GFALLYGFNH
WEAIRAFQEA QRIDPGCAMC YWGEAKARGP NINAPMDAGE ENPAVAAIKK AKAFAGKASA
KERALIEALA LRYVADGEET RAELDKRYAE AMEKIHKRYP GDQDIAVLYA EAQMDLSPWN
YWERDHKTPR PHIAGAIAAV ERVLAANPNH AGAIHLQIHL MEASAMPERA EKGAGRLADL
MPGAGHLVHM PGHIYFRVGR YLDSLETNVR AVAVDEAYLA KTEGSPIYRY GYYPHNVHFV
LVSAQMAGDA KTALDYARKL DGLIPFEAVT SAAIVQPVKV APYYAYLEFG SADDIANMPE
PPDNLPFVKG IWRYVQGVAA VRAGDLAAAR TEADAIAALR SDEALAPLAA ANVPAGNILL
LSETVLRARI DQREGALDAA RAKLEEALAL QDGLIYSEPP YWYYPVEQTL GAVLLEAGDA
DAAVARFRAA LVRHPNNAWS LYGLMKAQEA AGDGAVSYTA ELLRKAAFDP GAITLDRL
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