| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2232 |
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| Symbol | |
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| ID | 5454231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2406085 |
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| End bp | 2408904 |
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| Gene Length | 2820 bp |
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| Protein Length | 939 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640877811 |
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| Product | hypothetical protein |
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| Protein accession | YP_001413503 |
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| Protein GI | 154252679 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02226] N-terminal double-transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.610589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAAC TCGGGCCCCT CGCCTTCGCC AGCCCGTGGA TGCTGCTCGG CCTCGCCGCG
CTCCCGGCGA TCTGGTGGCT GCTGCGGATC AGCCCGCCGC TGCCCAAGCG CGTGCGCTTT
CCCGCCATCC GGCTCCTCGT CGGCCTTGCG CGCGAAGAGG AAACCCCGGC GCATACGCCC
TTCTGGTTGC TGCTGCTGCG ATTGCTGATC GCGGCACTGA TCGTCTTCGC GCTGGCGGAG
CCCTTGTGGA ACCCGGCGCC GCGCATTGCC GGTTCGGGGC CGCTGCTCAT CGTCACCGAC
AATGGCTGGG CTGCAGCCGC GCATTGGAGC GAACGCCGCA CCGCGATGGA CGGGCTCATC
GCCGAAGCAC GCCGCGCCGA CCGCCCGGTC CTCGTTGTCG GCACCGCGCC GGAGGCGAAT
GCGCCGGAAC TGAATTTCGA AGCCGCCGAC GATGCCGCCG CCCGCGCCCG CGCCATGCTG
CCCAACCCGA TTGAACCGGA CCGCATCGCT CTCATCGAAA AACTCGAAGG CGGCACGACC
CTGGCCAGCC GCAACGTCCA GACGGTCTGG ATTAGCGACG GGCTGGACTA TGGTGCCGCC
GCCCAGTTCG GCGAGCGGCT CTCGGCGCTC GCAGGTGCCG GCGGGCTGAC GCTCGTCGAA
CCGAAGCCGA TGGCGCGCGC CCTCGCGCTG CTGCCGCCGG AAGATGGTGG CGGCGCGCTC
ACCGCCACGG TCGTTCGCGC CTTGGCAGGG GGCGCGAGGG AAGGCAGCGT CCGCGCGATA
GGCAGTGAAG GCGGCGTTGT AAGCGAGGCA CCCTTCCAGT TCGCCGGAGG GGATACGCGC
GCCGCCGCGA TATTCGAATT GCCGCTTGAA CTGCGCAACC GCGTGGCCCG GCTGGAAATT
AGCGGGGAAG CCTCGGCGGG CGCCGTCGTG CTTGCGGATG AACGCTGGCG CCGCCGCAGT
CTCGGCATCG TATCCGGCGC GGGCGCGGAA GAGGCCCAAC CGCTCCTCTC GGACGTCTAT
TATCTGCGCC GCGCGCTCGC ACCTTACGTC GAGCTGCGCG AGACGGGCTC CGGGCGCAAC
ACAAGCGAGA CGATTGAAGA ACTGCTCGCG TCGCCGCTTT CCGTTCTCGT GCTTGCCGAT
ATCGGCAATC TCGGCGAAGA CGATATCGCG CGCGTGCGCG AATGGGTGGA AGCGGGAGGC
CTGCTGATCC GCTTCGCGGG CCCCCGTCTC GCCGAAGGGA GCGACGATCT CGTGCCCGTG
CCGCTTCGCA GCGGCGGGCG GGCGCTGGGC GGCGCCCTGT CATGGAGCAC GCCGCAGAAC
CTAGCCGCCT TCGAGGAGGG CAGTCCTTTC TTCGGTCTCG AGGTGCCCTC GGATGTCACC
GTGTCGCGGC AGGTGCTGGC GGAACCAGCA CCCGACCTCG CCGCCGCGAC CTGGGCAAGG
CTGAGCGACG GCACGCCCCT CGTCACAGCC GCCAGGCGCG GAAACGGCAC CGTCATTCTC
TTCCACGTAA CGGCGAACCG CGACTGGTCG AACTTGCCGA TCTCCGGCCT CTTCGTCGAA
ATGCTCCGCC GTTCCGTCGC CCTCTCGCAG GGAACGCCCG CCGCCGGTGA AGGCGCGGCC
GGGGAATCGG GTGCGGCGGC GCGCGAACGT GAGCTCCTTT ATCCGGTGGC GACGCTGGAC
GGCTTCGGAC GTCTCGGCAC ACCGCCGGCG ACCGCGACCG CGATTTCCGC CGAGCAGTTC
GGCAGCGCCG AACGAAGCCC GCGCCACCCC CCCGGCCTCT ACGGCACGGC AGCGAACCCG
CAGGCGCTCA ACCTCGCAAC GCCCTCTCTC GAACTGAAGG CAATGCCCGA AATGTCCGGC
ATCGCCGAAC GGCGCAATTT CGCGGGAAAT GCGGAACTGC GTCTTGCCGC TTTCGCCTTC
GCTATCGCGC TTCTCCTCGT CATCCTCGAT ACGGTGGCGG CCCTCTGGGT CACGGGATTG
TTCGAGACCG AGAAAATCCG GCGCGTGCGT TTCGGCACCC GCATCGCACC CGTCATTCTG
GCGGCCTTGT TCGTGCTGTC CGCCTTCGAC GCGCGCGCGC AGGACAGAAA CGCAGACCGC
TTCGCGCTTC AGGCCTCGCT CGAAACGCGC CTTGCCTATG TCATCACCGG CGACCGGGAA
ATCGACGAAA CCAGTGCGGC GGGCCTTGCC GGGTTGAGCC AGGTGCTGCG CGCGCGCACC
GCCTTTGAAC CGGGAGAACC GATGGGCGTC GACGTGACGC GCGACGAACT CGCTTTCTTC
CCCGTGCTCT ATTGGCCGAT GTCCGAGGGA CAGCAGACCC TTTCGCCGGA AGTGCTGGGC
AAGATCAACG CCTATATGAA GAACGGCGGC ACCATCCTCT TCGACACGCG CGACCAGGGC
AGCGCCATAG GCGCCGCCGC GCCCGGCACG GAAACATTGC GCCGCCTGCT TGGCCGCCTC
GACCTGCCGC CCATCGAGCC CGTCCCGGCC GATCACGTGC TGACGAAATC CTTCTATCTG
ATGCACAGCT TTCCCGGCCG CTGGCAGGGC GGACAAGTTT GGGTGGAGGC ATCGCTTGCC
GATGCGGGGA ACCCCGCCAA TGACGGCGTG TCCACCATCG TCGTCGGCTC GAACGATTAC
GCCGCCGCAT GGGCGCGCGA TGCGCGCGGA CGCCCGCTCT ATCCCGTATC GCCCGGCGGA
GAGCGCCAGC GCGAAATGGC GGATCGCTTC GGCGTCAATC TCGTGATCTA CGCGCTGACC
GGCAACTACA AGGCCGATCA GGTCCACGTT CCCGCGCTTC TTGAGCGCCT CGGTCAATAG
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| Protein sequence | MLQLGPLAFA SPWMLLGLAA LPAIWWLLRI SPPLPKRVRF PAIRLLVGLA REEETPAHTP
FWLLLLRLLI AALIVFALAE PLWNPAPRIA GSGPLLIVTD NGWAAAAHWS ERRTAMDGLI
AEARRADRPV LVVGTAPEAN APELNFEAAD DAAARARAML PNPIEPDRIA LIEKLEGGTT
LASRNVQTVW ISDGLDYGAA AQFGERLSAL AGAGGLTLVE PKPMARALAL LPPEDGGGAL
TATVVRALAG GAREGSVRAI GSEGGVVSEA PFQFAGGDTR AAAIFELPLE LRNRVARLEI
SGEASAGAVV LADERWRRRS LGIVSGAGAE EAQPLLSDVY YLRRALAPYV ELRETGSGRN
TSETIEELLA SPLSVLVLAD IGNLGEDDIA RVREWVEAGG LLIRFAGPRL AEGSDDLVPV
PLRSGGRALG GALSWSTPQN LAAFEEGSPF FGLEVPSDVT VSRQVLAEPA PDLAAATWAR
LSDGTPLVTA ARRGNGTVIL FHVTANRDWS NLPISGLFVE MLRRSVALSQ GTPAAGEGAA
GESGAAARER ELLYPVATLD GFGRLGTPPA TATAISAEQF GSAERSPRHP PGLYGTAANP
QALNLATPSL ELKAMPEMSG IAERRNFAGN AELRLAAFAF AIALLLVILD TVAALWVTGL
FETEKIRRVR FGTRIAPVIL AALFVLSAFD ARAQDRNADR FALQASLETR LAYVITGDRE
IDETSAAGLA GLSQVLRART AFEPGEPMGV DVTRDELAFF PVLYWPMSEG QQTLSPEVLG
KINAYMKNGG TILFDTRDQG SAIGAAAPGT ETLRRLLGRL DLPPIEPVPA DHVLTKSFYL
MHSFPGRWQG GQVWVEASLA DAGNPANDGV STIVVGSNDY AAAWARDARG RPLYPVSPGG
ERQREMADRF GVNLVIYALT GNYKADQVHV PALLERLGQ
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