Gene Plav_2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2216 
Symbol 
ID5455160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2391916 
End bp2392704 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content69% 
IMG OID640877795 
Producthypothetical protein 
Protein accessionYP_001413487 
Protein GI154252663 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.102366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATTC TCTCGCGGTT GGGAGGCAAG GGAAAACTGG AAGCGCCACC GGCGGAGGAA 
ACGCCGCCGG TAACGCAAGC CGCGCTTCAG CGCGCGCTGC GGGCAACGGC GCAGGCCTCC
GGCTCGTTGA CCGCCGCCGA GCTTGGCCAG CGCATCGCCA CGGCGCTGAG CACCATCGAA
ACCTCGGTGC TCGCCATCGA CGCCGTAACG GAGCGGCTGC GCGAGGCCGC CGAACTCGTC
GCGGATGCCC GCCGCAACGA CGATACCGGC CGCCGCGCCC TTCTCGCCGG CCGCTATGAC
GACCTCCGCT CGGAAATTGA TGCCATCGTC GGCTCCGCCT CGCATAACCG GATCAATCTC
ATTTCCGGCC GCCGCATCGG CGGCAAACTG ACGACCTTCG ACATCGCGCT CGATGACAGC
CAGCGTTCGG GCATCGCCAT CCAGGTGGCG AACCTGACGA CCGGCGAAGC CGGGCTCGCC
CTCTCGCCGC CGCGCGAGGC CTTCGCGGAT GACGCGGAAA TCGACACCAT CGCAAGCGAG
ATCGAAGCCG CCCGCGCCCG CGCCGCCGCC GTCAGCGACC GCTTCATGGA TCACGCCGCG
CTGATTTCCG ACCGCCTTTC CCGCCTGCGC GACATCGCCG GCCCCCGCTC CATGGAAACG
CACCTCCCCA CCGGCGCCGA CAGCGCCGAG CCGCCGCAGG CCGGCGAATA TGAGCTCGAC
ATGGCGCTGG TCGAGGACAA GCTGCGCGCC CTCGCCGACC GGCGGAAGAA GGACGGCGAC
GAAAACTGA
 
Protein sequence
MGILSRLGGK GKLEAPPAEE TPPVTQAALQ RALRATAQAS GSLTAAELGQ RIATALSTIE 
TSVLAIDAVT ERLREAAELV ADARRNDDTG RRALLAGRYD DLRSEIDAIV GSASHNRINL
ISGRRIGGKL TTFDIALDDS QRSGIAIQVA NLTTGEAGLA LSPPREAFAD DAEIDTIASE
IEAARARAAA VSDRFMDHAA LISDRLSRLR DIAGPRSMET HLPTGADSAE PPQAGEYELD
MALVEDKLRA LADRRKKDGD EN