| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2202 |
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| Symbol | |
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| ID | 5453374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2378567 |
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| End bp | 2379538 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640877781 |
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| Product | high-affinity nickel-transporter |
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| Protein accession | YP_001413473 |
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| Protein GI | 154252649 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.132612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGC TGTTGCTCAC CTTGGCATTC ACGGCAATCC CGGAAATTTC CGTTGCCCAG
AATCCCCTCA CCCTCCCGGG GGAGCAAGCG GCAGCTTCGC CTGGCACCGG CATTTTCAGC
GGTGCCGCGC ATTATATCAT GACCATGCAG CAGGAATATT ATCGCGCGAT GGCGGCCGCC
TTGCGCGCGG TCAACCTGCA GCAGTCCTTC ACCGCCGTTT GGGGCCTTGT GTCCATTTCC
TTTCTCTATG GCATTTTTCA TGCCGCCGGC CCCGGTCACG GAAAGGTCAT TGTGTCCTCA
TACATCCTGG CCGATGAGCG CGAGGTGAAG CGCGGCATTC TGATCGCCTT TCTCTCCGCC
CTCGCGCAAG CAGCCACTGC GATCCTCGCG GTCGGCATCC TCGCCGTCAT TCTCGGCTTC
AGCCACCGCG CGACAACCGA CATGGTTCCG CTGATCGAGC GTGCCAGTTT TGCGCTCATA
GCCGGCGTCG GTGCGTGGCT GCTCTGGCGT GCCTTTCGGG GCGAGAATCA TCATGAGCAT
GGCCATGTCC ATCATGACCA TGACCATGAC ACTCACGAGC ATGATCACGC GCATATCCCG
ACACCTGCCG ACATTCGGGC AGCAAAACGA AAGGGTGTTC GCGGCATGGC GGCCATGATC
CTTTCAGTCG GCCTGAGGCC GTGCACAGGC GCTATTCTCG TGCTGCTTTT CGCGGTAACG
CAGGGGGCTT TTTCCATAGG TGTTATGTCC GCCATTGTGA TGTCGGTAGG CACTGCCATT
ACCGTTTCCG CCTTGGCGCT CATGACCGTA TTTTCCAAAC GGCTGGCGCT TCGTTTCGCC
GGTGGAGTGG ATAGTCCCTG GGCCCGGCGT GTCGAGCGGG GCCTCAAAAT AGCAGGAGGC
TCGGTAATAT TGCTGTTCGG GATGATGCTG CTTGTCGCCT CCTTTACGCA GCCCCCACAA
CCCCTGCTAT AG
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| Protein sequence | MTLLLLTLAF TAIPEISVAQ NPLTLPGEQA AASPGTGIFS GAAHYIMTMQ QEYYRAMAAA
LRAVNLQQSF TAVWGLVSIS FLYGIFHAAG PGHGKVIVSS YILADEREVK RGILIAFLSA
LAQAATAILA VGILAVILGF SHRATTDMVP LIERASFALI AGVGAWLLWR AFRGENHHEH
GHVHHDHDHD THEHDHAHIP TPADIRAAKR KGVRGMAAMI LSVGLRPCTG AILVLLFAVT
QGAFSIGVMS AIVMSVGTAI TVSALALMTV FSKRLALRFA GGVDSPWARR VERGLKIAGG
SVILLFGMML LVASFTQPPQ PLL
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