| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2130 |
|---|
| Symbol | |
|---|
| ID | 5455266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 2311663 |
|---|
| End bp | 2312484 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640877707 |
|---|
| Product | dihydropteroate synthase |
|---|
| Protein accession | YP_001413401 |
|---|
| Protein GI | 154252577 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0294] Dihydropteroate synthase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01496] dihydropteroate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.202113 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCAAC GCCCGCGCAT CTTCGGCATC GTCAACATCA CACCGGATTC CTTTTCGGAT
GGCGGGAAGT ATTTCGCTGC CGATGCGGCC ATTGAGCATG CACGAAACCT GGCCTCGAAC
GGTGCCGATG TCATCGATCT TGGCCCCGCT TCGTCCAATC CGGATGCGGT TCCCGTGCCC
CCGGCGGAAG AAATCCGCCG CCTCGGCCCT GTGATCGAGG CACTTGCCGG GGACGGTATT
CCCCTCTCGG TCGACAGCTT CCATGTCGAA ACACAGGCCT TCGCCCTCGC GCATGGTGCA
GCCTATCTCA ACGATATTCA GGGCTTCGCA GAGCCCGCCG ACTATCCGGC GCTCGCGGCC
ACCGACGCCC GTCTCGTTCT CATGCATTCG ATCCAGGGGC GCGGCAATGC CGATCGGCGT
TCCGCGCCTG AAGGCGATAT TCTAGACCAT ATCGGACGTT TCTTCGAAGC CCGGCTGGCG
GCGCTGGAGC AGGCCGGCAT CGCCCGGGCG CGCGTCATTC TCGATCCAGG CATGGGTTTT
TTTGTCGGGC CGCGGCCCGA GACGTCTTTT TCGATTCTGG CCCGGCTAGG TGAGCTGAAG
GAACGGTTCG GCCTGCCGGT CTTCATATCC GTATCGCGCA AATCCTTCCT TCGCGCCGTT
ACCGGCCGTG CGCCGGGCGA GGCCGGTGCC GCCACGCTGG CGGCCGAGCT CATGGCCGCC
CTGAACGGCG CCGATTTCAT CCGGACCCAC GAGCCCGCAC CGCTTCTGGA CGCGTTTTCG
GTCGCCGCCT GTGTCGAGGC GGGACGCTCC CAGGGCCAAT GA
|
|---|
| Protein sequence | MFQRPRIFGI VNITPDSFSD GGKYFAADAA IEHARNLASN GADVIDLGPA SSNPDAVPVP
PAEEIRRLGP VIEALAGDGI PLSVDSFHVE TQAFALAHGA AYLNDIQGFA EPADYPALAA
TDARLVLMHS IQGRGNADRR SAPEGDILDH IGRFFEARLA ALEQAGIARA RVILDPGMGF
FVGPRPETSF SILARLGELK ERFGLPVFIS VSRKSFLRAV TGRAPGEAGA ATLAAELMAA
LNGADFIRTH EPAPLLDAFS VAACVEAGRS QGQ
|
|---|
| |