| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2125 |
|---|
| Symbol | |
|---|
| ID | 5455847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 2305681 |
|---|
| End bp | 2307012 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640877702 |
|---|
| Product | tRNA(Ile)-lysidine synthetase |
|---|
| Protein accession | YP_001413396 |
|---|
| Protein GI | 154252572 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
|---|
| TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.378443 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 0.301003 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC AGGATAAAAC CGCGCGGACA ATGTCATCTC CCGTTTCGCC GGCTGAATTT
TCCACCCGTC TTTCCGTTCT CAAGCCCTCG AAGAAAATCG CCATCGCCTT TTCAGGCGGT
CCGGATTCGT TGGCGTTGCT CATTCTCGCT GCGGAGTGGG CGAAGAAACG CCGCGGGATT
TCCCTTGTCG CGTTTACCGT CGATCACGGC CTTCGCGCCG CGTCGGCTGC CGAAGCAAAG
GCCGCGGCCC GTCTTTCGGA CGAGCTGGGC GTTCCCCATC GCACTCTAAA GTGGCGTGGC
GTAAAGCCCG CCAAGGGTAT TCAGGCAGCG GCCCGCGATG CGCGGTATGC CTTGTTGCTT
GCCGCCTGCC GTTCCTTCGG AGCGGGTGAT CTTCTGGTCG CGCATCATCT TGAAGATCAG
GCAGAGACCT TCCTGCTGCG CCTGGCGCGC GGCAGCGGCG TCGACGGGCT CGCCGCCATG
CCCCGGGCAA GACCGCTTTC CGACGAAGAG CCGGCAGTGC GGCTCCTCCG GCCACTTATC
GACCTGCCCC GGTCGCGGCT CCTTGCGACC GTGGCGCGGG CGGGGCTCAC CGCGATCCAC
GATCCCAGCA ACGAAAATGA GCGATTCGAT CGTGTAAAGG CGCGCAAGGC GCTCGCCCTT
CTCGCTCCGC TGGGTCTCGA TGCTGCCCGT CTTGCCCGCA CGGCGGAGCA TATGGCGCGC
GCGCGTCTGG CGCTGGAGGA TGAGACGGCG GCGCTGTTGC GCACTCACGC CGTTCTTTCG
TCTTTCGGTC ATGTGGAGAT CAACATGGCT GCCTTCCTTG CCGCTCCTGC GGAGATCGGC
CTGCGCGTTC TCGGCGCTCT CTGCCGCATT GTCGGCGGTG GCGGATACGG GCCGCGTATG
GAGGGGCTGG AAGAGGTCTA TCAGGCTGCG GGAACAGGAA CTCTTGGAAA GGGCCGGACC
CTTCATGGGG TGAAGCTTGC GGCCTCTCGC GGCTCTCTCG TCGCCACACG GGAATTGGAG
GCGGCAAAGA AGTCGCCAGC GATCATTCTG AAAGCGGGAG AGGAAGGGCT TTGGGACCGC
CGTTTCGACA TTCGCTTGAA GAAGGCACCA CGTGGGGCGG TTTATGAGGT TCGGGCGCTT
GGGTCCAACG GGCTCGCCGC CTTGAAAGCG GCCGGCATTC CGCTTCCAAA GGGGCAGAGA
TCCATACTTT TGCCCCTGCC GGGGCTGTGG CGGGAGGGGC GTTTAGCCAT CGCGCCCCAT
TTAGGGACAC TCGACCCTGC GGTTCAAGCG GAAGCCAATT TCCATCAAGG TGGCTTCGCC
GGACGGGGAT AA
|
|---|
| Protein sequence | MSAQDKTART MSSPVSPAEF STRLSVLKPS KKIAIAFSGG PDSLALLILA AEWAKKRRGI
SLVAFTVDHG LRAASAAEAK AAARLSDELG VPHRTLKWRG VKPAKGIQAA ARDARYALLL
AACRSFGAGD LLVAHHLEDQ AETFLLRLAR GSGVDGLAAM PRARPLSDEE PAVRLLRPLI
DLPRSRLLAT VARAGLTAIH DPSNENERFD RVKARKALAL LAPLGLDAAR LARTAEHMAR
ARLALEDETA ALLRTHAVLS SFGHVEINMA AFLAAPAEIG LRVLGALCRI VGGGGYGPRM
EGLEEVYQAA GTGTLGKGRT LHGVKLAASR GSLVATRELE AAKKSPAIIL KAGEEGLWDR
RFDIRLKKAP RGAVYEVRAL GSNGLAALKA AGIPLPKGQR SILLPLPGLW REGRLAIAPH
LGTLDPAVQA EANFHQGGFA GRG
|
|---|
| |