| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2118 |
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| Symbol | |
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| ID | 5454234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2299624 |
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| End bp | 2300100 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640877695 |
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| Product | Pol-Pal system-associated acyl-CoA thioesterase |
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| Protein accession | YP_001413389 |
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| Protein GI | 154252565 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase |
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| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.296225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.477442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAACT GGCCTGATCT TGCCGGCCGG ATCGAGGGGC AGGTGCACAA GCTGCCGATC
CGCGTCTATT ACGAAGACAC CGACTTTTCC GGTATCGTTT ACCACGCCAA TTATCTGAAA
TTCGCGGAAC GGGGGCGATC GGATTTTCTG CGCCTCGCCG GCGTTCATCA CACCGACCTT
TTCGAGGGCG AAGACCCCGT CGCCTTTGCC ATCCATCGTA TGGAGATCGA TTTCCTCAAA
CCGGCTCGTA TTGACGAGCG GCTTGAGGTG CATACGCGCT ATGTCAGGGC GAGCGGCGCG
CGAATTGAGG CGGAACAGGA GATCTGGCGC CTGAGCGGCG ACGCTCCCGA CGTGATCTGG
CGTGCTCGCG TGCTTGCCGC GGTGCTTGAT GTGGGTGGAC GGCCGCGCCG GCTGCCAGCC
GCTGTACGAG AGGCCTTGGC TCCTTTGGTG GTGGCTTCGG CCGCCGGTCC GGGGTGA
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| Protein sequence | MSNWPDLAGR IEGQVHKLPI RVYYEDTDFS GIVYHANYLK FAERGRSDFL RLAGVHHTDL
FEGEDPVAFA IHRMEIDFLK PARIDERLEV HTRYVRASGA RIEAEQEIWR LSGDAPDVIW
RARVLAAVLD VGGRPRRLPA AVREALAPLV VASAAGPG
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