| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2084 |
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| Symbol | |
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| ID | 5456289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2268041 |
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| End bp | 2269939 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640877661 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001413355 |
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| Protein GI | 154252531 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.471619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.000000265688 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGACGCT ACAAGGACAC CTACGACGCC TGGAAGCGCG ATCCGGAAGG CTTCTGGGCG
GAGGCGGCGA AGGAGATCGA CTGGTTCAAG CCCGCCGATA AAATCCTCGA AGAGAAAAAC
GGCCTCTCCC GCTGGTTCGT CGGCGCCGAA ACCAATTCCT GCTGGAATGC GCTCGACCGC
CATGTGAAGG CGGGCCATGG CGACCGCACC GCGCTCATCT ATGACAGCGC CATGCTCGGC
CGCGTGAAAA AATTCACTTA CGCCGAACTC CTCGACAAGG TCGCGACCTT CGCGGGCGTC
CTCCAATCCC ACGGCATAAC GAAGGGCGAC CGCGTCCTCA TCTATATGCC GATGGTGCCG
CAGGCCGCCG TCGCCATGCT CGCCTGCGCG CGGCTGGGCG CGATCCATTC GGTCGTCTTC
GGCGGCTTCG CGGCGAAGGA GCTCGCGACC CGCATCGACG ATGCCAAGCC GAAGCTCATC
GTGTCTGCCT CCTGCGGCCT CGAGCCCGGC CGCGTCATCG CCTACAAGCC GCTCATGGAC
AAGGCGATCG AGATGAGCGC GCACAAACCC GCCGCCTGCA TCGTCCTCCA GCGCGAGATG
GAAGAAGCGC CGCTGATCCC GGGCCGCGAT TTCGACTGGA AGGCGGAGAT GGACAAGGCC
GCCGCCGCGA ACAACAAGCC CGATTGCGTG TCCGTCGCCG CCACCGACCC GCTTTATGTC
CTCTACACAT CCGGCACCAC CGGCAAGCCC AAGGGCGTCG TCCGCGACAA TGGCGGCCAC
ATGGTGGCGC TCAAATGGTC GATGAAAAAT GTCTACGACA TCGACCCCGG CGACACGTTC
TGGGCGGCCT CCGATGTCGG CTGGGTCGTC GGCCATTCCT ACATCGTCTA TGCGCCGCTC
TTTCATGGCT GCACCACCAT CCTCTTCGAG GGCAAGCCCG TCGGCACGCC GGATGCCGGC
ACCTATTGGC GCATCATCGC GGAGCATGGC GTGAAGGCGC TCTTCACCGC GCCCACAGCC
TTCCGCGCCA TCCGCAAGGA AGACCCGAAG GCCGAACTCG TCGGCAAATA CGACCTCACG
AAATTCGAGG TGCTCTATCT CGCGGGCGAG CGCGCCGATC CCGACACGAT CCAGTGGGCG
GAGCAGGCGT TGCAGCGGCC GGTCATCGAC CATTGGTGGC AGACCGAAAG CGGCTGGCCG
ATGGTCTCGA ACCCGATGGG CATCGAGCGG CTGCCGGTGA AGCACGGCTC GCCCTCCGTG
CCGCTGCCCG GCTATGAAAT CCATGTCGTC GACGAAGCCT GCAAACAGGT CGGGCCGAAC
ACGACCGGCG CCATCGTCGT CAAGCTGCCG CTGCCACCGG GCTGCCTGCC GACGCTCTGG
GAAAACGAGG CAGGCTTCCG CGAAAGCTAC CTCGCGGATT ATCCCGGCTA CTACAAGACG
GCCGATGCCG GCTTCCTTGA TGAAGACGGC TATCTCTACG TGATGAGCCG CACCGACGAC
ATCATCAACG TCGCCGGCCA CCGCCTCTCC ACCGGCGGCA TGGAGGAAGT CCTCGCCGCC
CATCCGGACG TCGCCGAATG CGCCGTCATC GGCATCGCGG ATGCGATGAA GGGTCAGGTC
CCGGTCGGCT TCCTCGTCCT CAATGCGGGC GTCGCGCGCC CCGCTGCCGA GATCGAGCAG
GAAGCCGTAC AATTGATCCG TGAACGGATC GGCCCCGTCG CCTCCTTCAG GAAAGCGATG
GTCGTCCAGC GCCTCCCGAA AACCCGCTCC GGCAAGGTGC TCCGCGGCAC CATGCGCAAG
ATCGCCGATG GCGCGGAATG GACCACGCCC GCCACCATCG ACGACCCGGC GATCCTCGAC
GAGATCAAGA CGGTGCTGGA GCGGGAACTG GCGCGGTAG
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| Protein sequence | MGRYKDTYDA WKRDPEGFWA EAAKEIDWFK PADKILEEKN GLSRWFVGAE TNSCWNALDR
HVKAGHGDRT ALIYDSAMLG RVKKFTYAEL LDKVATFAGV LQSHGITKGD RVLIYMPMVP
QAAVAMLACA RLGAIHSVVF GGFAAKELAT RIDDAKPKLI VSASCGLEPG RVIAYKPLMD
KAIEMSAHKP AACIVLQREM EEAPLIPGRD FDWKAEMDKA AAANNKPDCV SVAATDPLYV
LYTSGTTGKP KGVVRDNGGH MVALKWSMKN VYDIDPGDTF WAASDVGWVV GHSYIVYAPL
FHGCTTILFE GKPVGTPDAG TYWRIIAEHG VKALFTAPTA FRAIRKEDPK AELVGKYDLT
KFEVLYLAGE RADPDTIQWA EQALQRPVID HWWQTESGWP MVSNPMGIER LPVKHGSPSV
PLPGYEIHVV DEACKQVGPN TTGAIVVKLP LPPGCLPTLW ENEAGFRESY LADYPGYYKT
ADAGFLDEDG YLYVMSRTDD IINVAGHRLS TGGMEEVLAA HPDVAECAVI GIADAMKGQV
PVGFLVLNAG VARPAAEIEQ EAVQLIRERI GPVASFRKAM VVQRLPKTRS GKVLRGTMRK
IADGAEWTTP ATIDDPAILD EIKTVLEREL AR
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