| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2000 |
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| Symbol | |
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| ID | 5454430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2184556 |
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| End bp | 2187630 |
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| Gene Length | 3075 bp |
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| Protein Length | 1024 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640877577 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001413271 |
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| Protein GI | 154252447 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium)
[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.195138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 85 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTT CGGAGCTTTT TATCCGCCGC CCGGTCTTCG CGACCGTGGT CAGCCTTATC
CTCATGCTTC TGGGGCTGGT CTCCTACGAT CGACTCTCCG TACGCGAGTA TCCGGCGATC
GACGAGCCTG TCGTGACGGT GACGACCGTC TATCGCGGTG CCAGCGCGTC CGTGGTCGAG
CGCGAAGTGA CGCAACCGCT TGAAGACTCC ATGGCGGGTA TCGAGGGCAT CGAAGTTCTC
TCATCCGCCA GCCGTCCCGA AGAGAGCCAG GTGACAGCGC GCTTTACGCT GGAAACGGAC
CCGGATGTGG CCGCGAGCGA CGTACGCGAC CGTGTTGGCC GTGCGCGCGG TTTACTGCCT
GACGACGTCG AGGAGCCAAT CATTGCGAAG GTCGAGGCCG ACGCGCAGCC GATCATGTAT
ATCGCCTTCA AGAGCGATCG AATGTCGGCT TTGGAAATTA CCGACTATCT CGACCGTATC
GTGACGGACC GTCTGCAGAA CCAGCCCGGC GTCGCGCAGG TAAGCATTTT CGGCGGCCGC
GAATATTCCA TGCGCATCTG GATAGATCGC CTGCGCCTGG CGGCCTACAA CCTCACGGTT
CAGGACGTCG AGAATGCGAT CCGGGCGCAG AATGCCGAAA TTCCTTCGGG CCGTATCGAA
AGCCTGGACC GCGAGTTCAC GGTGCTTGCG AAAACGGCGC TGCAGACGCC GGAACAGTTC
GAAAATATTG TCGTCAAAGA GGCTGACGGG TTTCAGGTCC GGCTTGCGCA AGTCGCGCGC
GTCGAGGTGG CGGCGGCCGA CATCCGGCGC TCGGCGACCT ATAATGGCGA GACCTCAATT
TCGCTTGGTG TCGTAAAGCA GGCGACGGCA AATCCGCTTG AAGTGGCTGC CGGTGTACGG
CGCGCGCTCG ACGATCTGGC GCCGACGCTG CCGGTCGGAA TGTCATCAGC CGTCGGCTAC
GATACGTCGA TCTTTATCGC GGAATCGATC AAGTCCGTTT ACGAGACGAT CGGTGAAGCG
ATCGTCCTTG TGGTGCTCGT CATTTTCGTC TTCCTGCGAA CGCTGCGTGC GTCTTTCATT
CCCGTGGTCA CGATTCCGAT TTCGCTCATT ACCAGCTTTG CGATCATGTT GATGCTCGGA
TTCAGCATCA ACACGCTGAC GCTGCTGGCG ATGGTGCTTG CTATCGGCCT TGTGGTCGAT
GACGCCATTG TGATGCTGGA AAATATCTAC CGGCATATCG AAGAAGGGAT GACGCCGTTT
CAGGCGGCCA TCACCGGTTC TAAAGAGATT ACGTTTGCCG TCATCGCCAT GACGCTGACC
CTTGCCGCTG TGTACGCACC CGTCGGTTTC GCGGAAGGCC GAACCGGCAA GCTCTTTCTC
GAGTTTGCAT TGACCCTTGC CGGCACGGTG ATCGTTTCCG GCTTTGTGGC TCTCACTCTG
ACACCGATGC TTTGTTCGAA GCTTCTAAGG CACGAGACGA GCGAGGGCAG AGTGCAGCGC
TGGCTCGGCC GGCAGCTCGA CCGCATCGAT GGCGCCTACA AGCGTTCACT CGAACGTGCC
CTGTCCATGA CCCGCGTCGT TGTCGGGGTC GCTGCAATCA TTGCTTTGTC GTGCGTCGGA
TTGTTCTTTC TACTGCAGCA GGAGCTCGCG CCCATCGAAG ACCGGGGCAC ACTGCTTGTC
GTCGGTCAGG CGCCGCAGGG GGCAACGCTT GAGTTCTCCG CGCGCTATGC GAAGCAGATC
GAAAGCATCT ATGTCGATAT TCCGGAGGTT GCCGGCTATC TGGTCGTTTC CGGTTTCCCC
CAGATTACCG ATCTTGTTTC CTTTTCTCGC CTCGCGCACT GGAGTGAGCG GTCGCGCACG
CAGCAGGAAA TTGTCGACGA GATTCAGCCC AAACTCGCGC GTATTCCCGG TATTCTGGCC
TTCGGCGTCA ACCCGCCCTC TCTCGGCCAG AGCGGCCGTT CGCAGCCCGT TGAATATGTC
ATTCAGGCAT CCGGTACCTA TGAAGAACTC GACCATTATG TCGAGCTGAT GATGAATGAA
ATCCGGAACA ATCCGGGTTT CGTCAATCCG GACTCAAACC TGAAGCTGCA GAAGCCTCAG
CTTGATATCG AGGTGAACAG AAGCAAGGTG GTAGATGCGG GGATCGACGT GTCGACGGTC
GGCCGCACGC TGGAAACCCT GCTCGGTAGC CGGCAGATCA CACGCTATGA GCAAGGCGGG
CAGCAATACG ACGTGATTGT TCAGGTTGCC GAAGATGAGC GGCGCACGCC GACCGACATC
AGCAATATCT ACGTCCGGGG CGGCAAGGGA GAAATGGTGC AGCTCTCCAA TCTTTTGACG
GTGAGCGAAA GCGTTGCACC CAATTCGCTC AACCGTTTCA ATCAGCTTCG CGCTGCAACG
ATTTCGGCAA ATCTCGCGCC GGGCTATTCC ATGGGGCAGG CTCTCTCGTT CCTTGAAGAT
ACGGCGGCGC GGATTTTGCC ATCCAACGCG CAGACGGATG TCGATGGCCA GCTTCGTGAA
TTCGTGAAGT CATCCGGCGC TATCGCGGTC ACGTTCGTGC TGGCGTTGCT GTTCATCTAT
CTCGTGCTTG CGGCGCAGTT CGAAAGTTTC GTCGACCCGC TGATTATTCT CGTCAGCGTT
CCGCTCTCGA TTGCAGGTGC GTTGTTGCTG CTGTTCCTGA CCAACACGAC GCTTAATATC
TACAGTCAGG TTGGGCTCAT TACCCTTGTC GGTCTCATCA GCAAGCATGG CATTCTGATT
GTCGAGTTCT CGAACCAGCT GCGCGAGAAG GGCCGCTCCG TTTACGACGC TGTAGTGGAA
GCGGCAGGAC TGAGATTGAG GCCCATTCTG ATGACCACGG GCGCGATGGT GCTTGGCGCC
TTGCCGCTGG CGCTTGCTGA CGGAGCGGGC GCGGAAAGCC GCCGTTCGAT CGGCCTCGTG
ATCGTGGGCG GGATCAGTTT CGGCACACTG CTGACACTCT TCGTAGTGCC GACCGTCTAT
CTTCTGATCG CCGGAGCGCG CGAGCGGCGC ATTGCCGCAA AGGCGGCGCG CGTTTCTCCG
GCGCCGGCCG AGTAG
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| Protein sequence | MNISELFIRR PVFATVVSLI LMLLGLVSYD RLSVREYPAI DEPVVTVTTV YRGASASVVE
REVTQPLEDS MAGIEGIEVL SSASRPEESQ VTARFTLETD PDVAASDVRD RVGRARGLLP
DDVEEPIIAK VEADAQPIMY IAFKSDRMSA LEITDYLDRI VTDRLQNQPG VAQVSIFGGR
EYSMRIWIDR LRLAAYNLTV QDVENAIRAQ NAEIPSGRIE SLDREFTVLA KTALQTPEQF
ENIVVKEADG FQVRLAQVAR VEVAAADIRR SATYNGETSI SLGVVKQATA NPLEVAAGVR
RALDDLAPTL PVGMSSAVGY DTSIFIAESI KSVYETIGEA IVLVVLVIFV FLRTLRASFI
PVVTIPISLI TSFAIMLMLG FSINTLTLLA MVLAIGLVVD DAIVMLENIY RHIEEGMTPF
QAAITGSKEI TFAVIAMTLT LAAVYAPVGF AEGRTGKLFL EFALTLAGTV IVSGFVALTL
TPMLCSKLLR HETSEGRVQR WLGRQLDRID GAYKRSLERA LSMTRVVVGV AAIIALSCVG
LFFLLQQELA PIEDRGTLLV VGQAPQGATL EFSARYAKQI ESIYVDIPEV AGYLVVSGFP
QITDLVSFSR LAHWSERSRT QQEIVDEIQP KLARIPGILA FGVNPPSLGQ SGRSQPVEYV
IQASGTYEEL DHYVELMMNE IRNNPGFVNP DSNLKLQKPQ LDIEVNRSKV VDAGIDVSTV
GRTLETLLGS RQITRYEQGG QQYDVIVQVA EDERRTPTDI SNIYVRGGKG EMVQLSNLLT
VSESVAPNSL NRFNQLRAAT ISANLAPGYS MGQALSFLED TAARILPSNA QTDVDGQLRE
FVKSSGAIAV TFVLALLFIY LVLAAQFESF VDPLIILVSV PLSIAGALLL LFLTNTTLNI
YSQVGLITLV GLISKHGILI VEFSNQLREK GRSVYDAVVE AAGLRLRPIL MTTGAMVLGA
LPLALADGAG AESRRSIGLV IVGGISFGTL LTLFVVPTVY LLIAGARERR IAAKAARVSP
APAE
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