Gene Plav_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1988 
Symbol 
ID5455490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2171413 
End bp2172003 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content61% 
IMG OID640877564 
ProductYceI family protein 
Protein accessionYP_001413259 
Protein GI154252435 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones99 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCC TTACCAGGAT CGCCGCCGCG GCCGCCGCCC TCGCCTTTCT GGCGAGCCCC 
GCGCTTGCCG CCGAACGCTA CGAGATCGAC GGGTCGCATA CGCATGTCGG CTTCGAGATC
AACCATCTCG GCTTTTCGAC GACTTATGGC CGCTTCAACG ATGTGAGCGG CACCATCATG
CTGGACGCGG AAAACCCCGA GGCGAGCAGT GTCGAGGTGC GGATCGTGAC GGCGAGCCTC
GACACGGCGC ATGAGGAACG CGACAAGCAT GTGAAGGGTG CGGATTTCCT CAACGTCGAG
GAATTTCCCG AAATCACCTT CAAGTCCACC AAGATCGAGC GGACGGGAGA GACCACAGGG
AAACTCACCG GCGATCTGAC CCTGCATGGC GTGACGAAGC CGGTGACGCT GGAAGCGACG
CTGAACAAGA TGGGCCCCTA TCCGATGGCC GAGGAAGGCC AGGAAATCCT GGCGGCGGGC
TTCGACGCCA AGGGCACGCT GAAACGCTCC GATTTCGGCA TGGATACCTA CATCCCGATG
ATCAGCGACG AGGTGGTGAT CGCGATCTCG CTGGAGGCGC AGAAGAAATA G
 
Protein sequence
MNSLTRIAAA AAALAFLASP ALAAERYEID GSHTHVGFEI NHLGFSTTYG RFNDVSGTIM 
LDAENPEASS VEVRIVTASL DTAHEERDKH VKGADFLNVE EFPEITFKST KIERTGETTG
KLTGDLTLHG VTKPVTLEAT LNKMGPYPMA EEGQEILAAG FDAKGTLKRS DFGMDTYIPM
ISDEVVIAIS LEAQKK