| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1949 |
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| Symbol | |
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| ID | 5454931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2126147 |
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| End bp | 2128225 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877526 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_001413221 |
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| Protein GI | 154252397 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAA TCAACGATGT CACCACGCTT GAGACGGTGG GCGAAGTCGC CGTACTCACG
CTGAATTCGC CGCCCGTGAA CGCCCTTTCC GCGCCCGTGC GCGAGGGGAT CAACAACGGC
ATCAAACAGG CGATGGAGAA CGACGCCGTG AAGGCGATCG TGCTGATCTG CGAAGGCAAG
ACCTTCATCG CGGGCGCCGA CATCACCGAA TTCGGCAAGG CGCCGGCGGG CCCGAGCCTG
TTCGATGCGC TCAACATGAT CGAATTCGCC TCGAAGCCCG TTATCGCCGC CATCCACGGC
ACGGCGCTGG GCGGCGGCCT CGAAGTGGCG CTGACCTGCC ATTACCGCGT GGCTGTGCCC
TCCGCCAAAT GCGGATTGCC GGAAGTGAAT CTCGGCCTGC TGCCGGGCGC GGGCGGCACG
CAGCGCCTGC CGCGCATCGT CGGGCCCGAA AAGGCGCTCG AAATGGTGAC GAGCGGGAGC
CATGTCGGCG CGAAGAAGTG CCTGGAGATG GGGCTCGTCG ACGAGCTGAC GGAAGAAGGC
AAGCTGCGCG ACGGCGCCAT CGCCTTCGCG AAGAAGATCG TCGCCGAGAA ACGGCCGCTG
AAGCGCGTGC GCGACCTGAG CGACAAGGTG GAAGCGGCGC GCGGCAAGCC GGAGATTTTC
TCCGAGTTCC GCAAGGCCAA CGCCCGCAAG TTCCGCGGCT TCCTCGCGCC CGAATACAAC
ATCCAGTGCA TCGAGGCGGC GGTGAACCTG CCTTTCGATG AAGGCATCAA GGTGGAGCAG
AAGCTCTTCC GCGAACTCGT CACCGGCACG CAGTCCGCCG CGCAGCGCCA TGTCTTCTTC
GCCGAACGCC AGGTCTGGAA GCTGCCGGAT GTGCCGGCCG ACACGCCGAC CATCCCCGTC
AACAAGGTCG GCATCATCGG CGCCGGCACG ATGGGCGGCG GCATCGCCAT GAACTTCCTC
AATGTCGGCC TCCCCGTCAC CATCGTGGAG ACGAAGCAGG AAGCGCTCGA CCGGGGCATC
GCAACCATCC GCAAGAATTA CGAGAACTCG GCGAAGAAGG GCCGCTTCTC CATGGAGGAA
GTCGAGAAGC GCATGGGGCT TCTCACCGGC TCGCTCGAGA TGGAGGCGCT GGCCGACAGC
GACCTCGTGA TCGAGGCCGT GTTCGAGAAC ATGGATGTGA AGAAGCAGGT CTTCTCGAAA
CTCGACGCCA TCGTGAAGCA GGGCGCGATC CTCGCCACCA ACACGTCCGC CTTGAACATC
GACGAGATCG CGACCGCCGT GAAGCGGCCG GAAGCGGTGA TCGGCCTCCA CTTCTTCTCG
CCCGCCAACG TCATGCGGCT CCTCGAAGTC GTGCGCGCCG ACAAGACCTC GAAACCCGTC
ATCGCGACCT CCATGCAGCT CGCGAAGAAG ATCGGCAAGA TCGCCGCGCT TGTCGGCGTC
TGCCCCGGCT TCGTCGGCAA CCGCATCCTG GCACAGCGCC AGCGCGAGGC GCAGAAGCTG
ATCCTCGAAG GCGCCATGCC CTGGGATGTC GACCGCGTGC TCTACGATTT CGGCCTGCCG
ATGGGCCCCT TCGCCATGTC GGACCTTGCC GGGCTCGATA TCGGCTGGTC GAAGGAGAAG
TCGCAAGGCG CGACGATCCG CGACGTGCTG TGCGAGATGG ACCGCCGCGG CCAGAAGACG
GGCGCGGGCT TCTACGATTA CGACGAGAAC CGCAACGCGA AGCCCTCGCC GGTCGTGGAA
AAGATCATCC TCGACTTCGC CCAGAAGAAG GGCATCAACC GCCGCAAGAT TTCGGACGAC
GAGATTCTGG AACGCTGCAT CTATCCGATG ATCAACGAGG GCGCAAAGAT CCTCGAGGAG
GGCAAGGCGA TCCGTTCCTC CGACATCGAC ATCGTCTGGA TCAACGGTTA CGGCTTCCCG
GTCTATCGCG GCGGCCCGAT GTTCTACGGC GACACGGTGG GCGCCGACAA AGTGCTCGCC
AAGATGAAGG AATTCCAGGC GCAGATGGGC GACGACTTCA AGCCCGCGGC GCTTCTGGAA
AAGATCGTCG CGGAAGGCAA GAAGTTCTCG GACTTCTGA
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| Protein sequence | MTAINDVTTL ETVGEVAVLT LNSPPVNALS APVREGINNG IKQAMENDAV KAIVLICEGK
TFIAGADITE FGKAPAGPSL FDALNMIEFA SKPVIAAIHG TALGGGLEVA LTCHYRVAVP
SAKCGLPEVN LGLLPGAGGT QRLPRIVGPE KALEMVTSGS HVGAKKCLEM GLVDELTEEG
KLRDGAIAFA KKIVAEKRPL KRVRDLSDKV EAARGKPEIF SEFRKANARK FRGFLAPEYN
IQCIEAAVNL PFDEGIKVEQ KLFRELVTGT QSAAQRHVFF AERQVWKLPD VPADTPTIPV
NKVGIIGAGT MGGGIAMNFL NVGLPVTIVE TKQEALDRGI ATIRKNYENS AKKGRFSMEE
VEKRMGLLTG SLEMEALADS DLVIEAVFEN MDVKKQVFSK LDAIVKQGAI LATNTSALNI
DEIATAVKRP EAVIGLHFFS PANVMRLLEV VRADKTSKPV IATSMQLAKK IGKIAALVGV
CPGFVGNRIL AQRQREAQKL ILEGAMPWDV DRVLYDFGLP MGPFAMSDLA GLDIGWSKEK
SQGATIRDVL CEMDRRGQKT GAGFYDYDEN RNAKPSPVVE KIILDFAQKK GINRRKISDD
EILERCIYPM INEGAKILEE GKAIRSSDID IVWINGYGFP VYRGGPMFYG DTVGADKVLA
KMKEFQAQMG DDFKPAALLE KIVAEGKKFS DF
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