| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1939 |
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| Symbol | |
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| ID | 5453751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2114284 |
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| End bp | 2115567 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877516 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001413211 |
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| Protein GI | 154252387 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.421247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCGGCT TCCGTCTTTC AAGGCTCCGT TCCTTTGTGC GGATAGCGGC GCCGCTTGGC
GTCGTGTTCG GGCTTGCCCT TGCAGGCTGC GGCGCCACCG CTTCGACCGA TGTGCCGCGC
GGTGTGCCCA TGGCTCCGCC GGTCAGTGCC GACGCGCCGG CCTTCGCGGA TTGGCTCACC
GCCTTCCGCG AGGACGCGCT CAAGGCCGGT ATCGCTCCGG CCACTTTCGA CCGGTCCATG
AAGGGCGTGC GGCTCGACGA GAAAGTCATA GAGGCCAATG AAAGCCAGCC GGAGTTCACG
CGGCCGGTCT GGGAATATCT CGAAGGCGCG TTGTCCGATA CGCGCGTCGC GACGGGCAAG
CGGCTTCTCG CCGAGAACAA GGCGTTGCTT GACCGGATCG AGGCGCGTTA TGGCGTCGAC
CGTCATGTGC TGGTGGCGAT CTGGGGTCTC GAATCCAATT ACGGTTCCTT CCAGGGAACG
ATGAGCGTCG TTCGCTCGCT TGCGACACTT GGCTTTGAAG GCCGCCGCGT CGAATATGGA
CGTTCGCAGC TCATCGCCGC GCTTCAGATC ATCCAGAACG GCGATATTGC GCCCGAGCGC
ATGACCGGTT CCTGGGCGGG CGCGATGGGC CACACCCAGT TCATTCCCAC CACCTACAAT
GCCCATGCCG TCGATTTCGA TGGCGACGGG CGCCGCGACA TCTGGAATTC GCATGCGGAT
GCGCTTGCGT CCGCCGCGCA TTATCTCGGC AATTCCGGTT GGCAGCGCGG TGCCGTCTGG
GGCTATGAGG TGAAGCTGCC GCAAGGCTTC GATTACGGCG AGGCAGATAT GTCGGTGTCG
CAGCCGGTGG GCGAATGGCA GAAGCTTGGC GTCGCCCGCA TCGACGGGCG CCCGTTCCCG
AGTGGCGAGA TGGGCGAGAA GGCATCGATC TTCCTGCCGT CGGGCTATCG CGGCCCTGCT
TTCATCGTCA TGAACAATTT CCGTACTGTG CTCGCCTATA ACGCCTCGAC CTCCTATTCG
CTCGCCGTGA ACCTGCTCGC GGACCGGTTC AAGGGCAGGG GAGAGATCGT CGCCTCCTGG
CCCCGCGGCG ACCGGCCGCT TGGGCGTCAG GAACGCCACG ATCTTCAGCA GCTCCTGCTC
GACAAGGGTT ACGAGACGGG CGGGGTCGAC GGCATCATCG GCTTCAATAC GCGCAAGGCC
ATTCGCGCCT ACCAGGCAAG CCTCGGCCTT CCGGCGGACG GCTATCCGAC GCATGAGCTG
CTGGAGAAGC TGCGCGGCCG TTGA
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| Protein sequence | MPGFRLSRLR SFVRIAAPLG VVFGLALAGC GATASTDVPR GVPMAPPVSA DAPAFADWLT
AFREDALKAG IAPATFDRSM KGVRLDEKVI EANESQPEFT RPVWEYLEGA LSDTRVATGK
RLLAENKALL DRIEARYGVD RHVLVAIWGL ESNYGSFQGT MSVVRSLATL GFEGRRVEYG
RSQLIAALQI IQNGDIAPER MTGSWAGAMG HTQFIPTTYN AHAVDFDGDG RRDIWNSHAD
ALASAAHYLG NSGWQRGAVW GYEVKLPQGF DYGEADMSVS QPVGEWQKLG VARIDGRPFP
SGEMGEKASI FLPSGYRGPA FIVMNNFRTV LAYNASTSYS LAVNLLADRF KGRGEIVASW
PRGDRPLGRQ ERHDLQQLLL DKGYETGGVD GIIGFNTRKA IRAYQASLGL PADGYPTHEL
LEKLRGR
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