Gene Plav_1926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1926 
Symbol 
ID5454109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2097937 
End bp2098824 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content58% 
IMG OID640877503 
ProductUTP-glucose-1-phosphate uridylyltransferase 
Protein accessionYP_001413198 
Protein GI154252374 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.566816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.565416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTT CCCCCCGCAA GATCCGCAAG GTCGTCTTTC CCGTTGCCGG CCTCGGCACC 
CGCTTTCTGC CGGCGACCAA AGTCATTCCA AAGGAAATGA TGACCGTCGT CGACAAGCCG
GTCATTCAAT ATGCCGTGGA AGAGGCGATC GAGGCGGGTA TCGAACATTT TGTATTTGTG
ACAGGACGCG GCAAGGGCGC CATCGAGGAT CACTTCGATC TCGCTTACGA ACTTGAGGCC
ACGCTTAAGG CGCGCGGCAA GAAAGCAGAA TTCGAAATGC TGCAAGAAAG CCGCCCTGCT
GCCGGAACAG CAAGCTTCGT TCGCCAGCAA GAGCCGCTCG GGCTCGGCCA TGCAGTATGG
TGCGCACGTG ACATCATTGG TGATGAGCCG TTTGCTCTCG CCCTCCCCGA CATGCTGATC
CATGGCGCCC GTGGCTGCTT TGCCCAGATG GTCGATGTTT ACGAAGCTCA TGGAGGAAAT
GTGATCGCGG TTGAAGAAGT GCCCCATGAG CACGTCAACC GCTACGGCGT AGTCGCTCTC
GCGGAAAACC TCGGTAATGA AACGCATCGG GTTACCGGCA TGGTCGAAAA ACCGAAAGTT
GAGGACGCGC CATCCAACTT GATCATTTCC GGCCGCTACA TTCTGCAGCC GGAGGTTTTT
TCAAAGCTGG CCGTGCAGAA GCCGGGCGCA GGCGGCGAGA TTCAGCTGAC GGATGCGATG
ATTGCGTTGA TGGGCGAGCA GGATTTCTTC TCCTACCGCT TCGAAGGCAC CACCTATGAT
TGCGGCGACA AGATCGGCTA TCTCGCCGCC AATGTGGCGC TTGCCCTGTC GCGGCCGGAT
ATAGCGCCCA AGTTCCGGCC GGTCCTCGAC GAATTGACCC GCAAATAA
 
Protein sequence
MTTSPRKIRK VVFPVAGLGT RFLPATKVIP KEMMTVVDKP VIQYAVEEAI EAGIEHFVFV 
TGRGKGAIED HFDLAYELEA TLKARGKKAE FEMLQESRPA AGTASFVRQQ EPLGLGHAVW
CARDIIGDEP FALALPDMLI HGARGCFAQM VDVYEAHGGN VIAVEEVPHE HVNRYGVVAL
AENLGNETHR VTGMVEKPKV EDAPSNLIIS GRYILQPEVF SKLAVQKPGA GGEIQLTDAM
IALMGEQDFF SYRFEGTTYD CGDKIGYLAA NVALALSRPD IAPKFRPVLD ELTRK