| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1923 |
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| Symbol | |
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| ID | 5453526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2093816 |
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| End bp | 2094895 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640877500 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_001413195 |
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| Protein GI | 154252371 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.578659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.864029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGCTT CGAGACCGAA ACGGGCCCTT ATAACGGGCA TTACCGGACA GGATGGCGCC
TGGCTCGCGC GATTGCTGTT GGACAAAGGC TATATTGTCC ACGGTGTGAA GCGCCGCTCT
TCATCTTTCA ATACCGGCCG CATCGACGAT CTTTACCAGG ATCCGCATCT CGATAGCGTG
CGCCTGTTTT TGCACTATGG CGACCTGACC GACGCGACGA ACCTGATCCG TATCGTGCAG
GAAACCCAGC CGGACGAAAT CTACAATCTT GCGGCACAAA GCCATGTCCA TGTGAGCTTC
GAAACACCCG AATATACCGC CAATGCAGAT GCAGTCGGTA CATTGCGCTT GCTGGAGGCG
ATACGCATTC TCGGCATGTC GGAGACGGTC CGGTTCTACC AGGCATCGAC TTCGGAGCTC
TACGGCAAGG CCCAGGAAAC CCCGCAGAAT GAGCGAACGC CTTTTTATCC CCGCAGCCCC
TATGCCGTCG CGAAACTTTA CGCTTTCTGG ACCACGGTGA ATTACCGCGA GGCCTACGGG
ATGCATGCCT CCAACGGCAT ATTGTTCAAT CACGAGGGGC CGACGCGCGG TGAAACCTTT
GTGACGCGCA AGATAACGCG GGCGGTGGCG GCCATTGAGC TTGGTCTGCA GGACGTTCTT
TATCTCGGCA ATATCGATGC GCGGCGCGAC TGGGGTCATG CGCGCGACTA TGCCGAGGGG
ATGTGGCGCA TCGTTCAACA GGATGAACCG GACGATTATG TTCTCGCGAC CGGCGAGACG
CATTCCGTGC GCGAATTTGT TGAACTGGCG TTCGCGGAAG TCGGCAGGCA TATCGCGTGG
AAAGGCGAGG GCGCCGACGA AACAGGCGTG GATGCCGTAA ACGGTAAAGT CCTTGTCCGA
ATCGACCCGC GCTATTTCCG GCCGACAGAG GTTGACGTTC TTTTGGGTGA TCCGAGCAAG
GCCCATCAGA AACTCGGCTG GCGGCATACG ACTCAGTTCC CTGAACTGGT GGCCGAAATG
GTCGCTGCCG ATCTCAAGAC GGTAGCCAGG GAAGCCAGCC GGATCGGGCG GCATGACTGA
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| Protein sequence | MTASRPKRAL ITGITGQDGA WLARLLLDKG YIVHGVKRRS SSFNTGRIDD LYQDPHLDSV
RLFLHYGDLT DATNLIRIVQ ETQPDEIYNL AAQSHVHVSF ETPEYTANAD AVGTLRLLEA
IRILGMSETV RFYQASTSEL YGKAQETPQN ERTPFYPRSP YAVAKLYAFW TTVNYREAYG
MHASNGILFN HEGPTRGETF VTRKITRAVA AIELGLQDVL YLGNIDARRD WGHARDYAEG
MWRIVQQDEP DDYVLATGET HSVREFVELA FAEVGRHIAW KGEGADETGV DAVNGKVLVR
IDPRYFRPTE VDVLLGDPSK AHQKLGWRHT TQFPELVAEM VAADLKTVAR EASRIGRHD
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