Gene Plav_1828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1828 
Symbol 
ID5455503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1979903 
End bp1980403 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content54% 
IMG OID640877407 
Producthypothetical protein 
Protein accessionYP_001413102 
Protein GI154252278 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.763525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGCG TCGCCGTCAA CACATACACA TACTCCGTCA CATATGTAGC GGACAATATC 
CTGAAAAGCC TGAAAGACAT CATTCGTCTT AGCGGGCTGA ATCCATCGGA GTTCGTTGGC
GATTGGGAGA CCAACATGCG CGGTATTCAG ACCTGGCTGA GCACCGGCGA CCTTGAGACC
GTGAAGCTTG AGATCTATGA CCCGAAGACG AACACGCTGA TTTTTCGCTG GGACATTGAT
ATCTCCTATG GCTCGTCGGA TGGAGACGGT AGCTTCTGGA CCGACACCGA GCAGCTCAAG
TATGCGATAA AAAAGGCTGG TCTGGCACCA AGCGAGGCTC GCTATCGTAT GCTTGTGCAC
ACGAAGCCCG GTAGGCCTGA CGTGATCGGA TGGAGTAGGA CCAGCGGACG TTCGACAGAG
GGAATGGTCC GTCAAAGCCT TGGCACCACA GTTGAACACA GTGGCCTCGG CGCTCGCACA
TCATATCTGA GGAGAGCTTG A
 
Protein sequence
MTSVAVNTYT YSVTYVADNI LKSLKDIIRL SGLNPSEFVG DWETNMRGIQ TWLSTGDLET 
VKLEIYDPKT NTLIFRWDID ISYGSSDGDG SFWTDTEQLK YAIKKAGLAP SEARYRMLVH
TKPGRPDVIG WSRTSGRSTE GMVRQSLGTT VEHSGLGART SYLRRA