| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1798 |
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| Symbol | |
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| ID | 5455842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1953323 |
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| End bp | 1954162 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640877378 |
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| Product | regulatory protein IclR |
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| Protein accession | YP_001413073 |
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| Protein GI | 154252249 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.334584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCTA ATGTCCTCAA ATCCGAACAG CCGTCGGCTG CAACGGTAAA ATCCGCGACC
CGTGTTCTGG AGATTTTCGA GTATTTCGAC GAAGTAAGAC GCCCGGTGAC GATTCAAGAC
GTAGCGCAGG CGCTGAGTTA TCCTCATTCC AGCACCGCCG CCCTTCTGAA AAGCCTCGTG
AGCCTCGGTT ATCTGGAGCA CGACGACCGG GGCAAGACTT TTTTTCCAAG CATCCGGATA
TCTCTGCTGG GAAACTGGGT GGAAGCCGAG GCGTTACCGA TCCGGAATGT CCAGCGCCTT
ATGAGACGGC TTTCGGCCGA TACGGGATGC ACGATCATCC TCGCTGCGCG TCTAGGGGCT
TATGCTCAAT ATGTGAAGGT GATTCAAGGT ACGTCGCCCA TCCGCTTCCA TGTCAAGCCA
AGCACCAAGC GAATGCTCGC TTTTTCGACG ATTGGCCGCG TTCTGCTGAG CGAACTTCCG
TTGCCCGAAG CGAGACGTCT GATTCATGAT GCCCTTGCCG CCATGCCGGA GCGGCGGGAA
TCGATGCAGG AGATCGAAGA CGAACTGCAA AGAATCAGAA AACGCGGGCT TGCGCTTTAC
AGCGATCTCG TGACGCCGGG AGCGACTATG CTGGCGATGC CCATTCCGAT GGGTCCGTCC
GGACGCTCGG TCGCGATCGG CATAGCCGCT CCCAACGAGT ATTTTCGCAA TCGTAAACAA
CCGTTCACGG CGTTACTGAA AAACGCTATC GCCGAGCACA TCTCACAAAA CGGGCAAGGC
TTTAAGGAGA CTGTAGACGA CGAGGACCAA CTTGAAATCG ACGACGATAC AGCGCCATAA
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| Protein sequence | MNANVLKSEQ PSAATVKSAT RVLEIFEYFD EVRRPVTIQD VAQALSYPHS STAALLKSLV
SLGYLEHDDR GKTFFPSIRI SLLGNWVEAE ALPIRNVQRL MRRLSADTGC TIILAARLGA
YAQYVKVIQG TSPIRFHVKP STKRMLAFST IGRVLLSELP LPEARRLIHD ALAAMPERRE
SMQEIEDELQ RIRKRGLALY SDLVTPGATM LAMPIPMGPS GRSVAIGIAA PNEYFRNRKQ
PFTALLKNAI AEHISQNGQG FKETVDDEDQ LEIDDDTAP
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