| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1797 |
|---|
| Symbol | |
|---|
| ID | 5453879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 1952429 |
|---|
| End bp | 1953322 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640877377 |
|---|
| Product | alpha/beta hydrolase domain-containing protein |
|---|
| Protein accession | YP_001413072 |
|---|
| Protein GI | 154252248 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.392669 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTTG AGGAACTTGC TGTCGTTCGT CAGCTGCTTG CGGGCCTTGT GACCGGGGAG
GCTCGTTCTC TTGAGGATTT TCGTACCTCG TATGACGAGG CTGGCAAGGC GTTCGGTCTT
CCCGAAGGCG TGACGGTCAC GCCGGTTTCC GCCGGCGGGG TTCCCGGCGA ATGGCTGGCG
CCGGCTGCCG GTGCCGGCAA GCGGGTTTTG CTCTATCTGC ATGGAGGAGG CTATGCGCTT
GGTTCTCTCG ACTCGCATCG CCATCTTGCG GCGCGCGCAG CTCTTGCCCT GAAAGGCCGG
GTTCTGCTGA TCGACTACAG GCGGTCTCCA GAGCATCCAT TTCCGGCGGC TGTCGATGAT
GCGCTTGCTG CTTATCGCTG GTTGATCGAG ACGGGCGTCG ACCCGGTGAA GCTCGCTGTG
GCGGGAGATT CAGCCGGCGG CGGCCTGACG GTTGCCGTGC TTCTGGCGGC GCGCGATGCC
GGTCTCGGAC TTCCGGCTGC GGCCGTTTGT ATTTCGCCGT GGGCCAATCT TGAAAATAAA
GGTGCCTCTT ATGGCGCGAA AGCGAATGTG GACCCGATGG TGCGCCATGC CGATCTTGAG
CTGTGGACGG CGGCCTATCT GGGAACTTCA ACCCCGCGCA GGACGCCTCT GGCATCGCCG
GTATATGCCG ATCTCAAGGG ATTGCCGCCA TTCCTGATTC AGGTAGGCAG TTCGGAGGTT
TTGCTCTCGG ATAGCCACTT ATTGGCCGAT AGATTGAAAG AGGCTGGCGT ATCCGTCAAT
CTCCATGTCT GGCCGGAGAT GATTCATGTC TGGCACTGGT TTGCGCCGGT CTTGAGCGAA
GGCCGCGCGG CGATCGACGA GCTGGCCAGC TTCCTGGATA CAAAGCTCGG ATGA
|
|---|
| Protein sequence | MSLEELAVVR QLLAGLVTGE ARSLEDFRTS YDEAGKAFGL PEGVTVTPVS AGGVPGEWLA
PAAGAGKRVL LYLHGGGYAL GSLDSHRHLA ARAALALKGR VLLIDYRRSP EHPFPAAVDD
ALAAYRWLIE TGVDPVKLAV AGDSAGGGLT VAVLLAARDA GLGLPAAAVC ISPWANLENK
GASYGAKANV DPMVRHADLE LWTAAYLGTS TPRRTPLASP VYADLKGLPP FLIQVGSSEV
LLSDSHLLAD RLKEAGVSVN LHVWPEMIHV WHWFAPVLSE GRAAIDELAS FLDTKLG
|
|---|
| |