| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1778 |
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| Symbol | |
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| ID | 5457020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1931036 |
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| End bp | 1931839 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640877358 |
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| Product | GntR domain-containing protein |
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| Protein accession | YP_001413053 |
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| Protein GI | 154252229 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.393282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.0406668 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGA TCGCGTCCGT TTCACGAGTC AACCGATTTC CGAAAGGGTC CGGCAAGCGT
GCCCTCACAG TTGCAAGGCA GATTGTCGAG GACATCGAGC AGCAAGGTGC CGAGGTCGGA
GATCGCTTGC TGCCAGAACA GGAGATGCTC GTACGGTATG GGGTGGCCCG CGCGACTTTG
CGGGAGGCCC TCAGGTTTCT GGAACTGCAG GGCATCATTT TTCTGCGGCC CGGCCCTGGC
GGTGGGCCGA TCGTTCAGGA GCCCCGACCG AAAGATTTTG CCAGTACAAT GGCGTTGCTG
CTGCAGTTTC TCGGCACCAC GTTCCGTTCG CTGATTGAAG TGAGACAAGC GGTCGGCCCG
ACCATGGCGG CGCTTGCGGC GGAGCGTGCG TCCGATGAGG ATATCGACAA GCTGAATACG
TCATTGGCCA CTTTGAAGAC GCTGTCCGTA TCTTGCGACT CCTATGCGGA GGAGAACAGG
CGTTTCCACG ACGTGCTTGC ATGGGCGTCT GGCAATCCCT TGATCGGATT CCTAATCGGT
TCGCTTCACA ACATCACGAA TGCGTCGGAA GTCGGTATAA TTTATACGGA GGGTGAGCGT
GACTATCAGA TCAAGGCGTA CGGACGGCTT CTCAAGGCGA TTGAAGATCG CAACCCAGAC
CTCGCTTTCA CCGAAATGTC CCGGTTCATA AGCCGATCGG ACAAGTATCT GGAAGCTCGA
TATCCCGACA TCATGTCCAA AATCGTGCGT TGGCAGGATG CGGACGACCT GAGCGTGCCG
CGGGTTCCCC GACGGAAACG CTAG
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| Protein sequence | MKAIASVSRV NRFPKGSGKR ALTVARQIVE DIEQQGAEVG DRLLPEQEML VRYGVARATL
REALRFLELQ GIIFLRPGPG GGPIVQEPRP KDFASTMALL LQFLGTTFRS LIEVRQAVGP
TMAALAAERA SDEDIDKLNT SLATLKTLSV SCDSYAEENR RFHDVLAWAS GNPLIGFLIG
SLHNITNASE VGIIYTEGER DYQIKAYGRL LKAIEDRNPD LAFTEMSRFI SRSDKYLEAR
YPDIMSKIVR WQDADDLSVP RVPRRKR
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