| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1771 |
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| Symbol | |
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| ID | 5455464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1923484 |
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| End bp | 1924641 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877352 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001413047 |
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| Protein GI | 154252223 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | [TIGR03207] cyclohexanecarboxyl-CoA dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.426084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.166679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGACTTTG CCTTTACGTC CGACCAGGGA GCCATTCGAG ATACCGCCGC ACGATTTGCG
CGCGAGCGGC TCGCGCCCGC CTACAAGGTG CGCGAAACCG CCGGAGCGAT CGATCGACAG
CTCGTCCGGG ATATGGGCGA GCTTGGCCTC GTCGGCGCCG ATTTGCCCGA AAAATTCGGG
GCGCCGGGAC TCGATAGCGT TACGACCGGC ATTATTATCG AGGAAATATC ACGCGGCGAC
ATTAGCGTCG GTTATGTCCA GCTCCTGGGT TCGCTGATGG GATCGATCGT CGCCGCGCAT
GCAAGGCCTG AAGTCGCCGA TGAAATCGTT CCGAAGATTT GCTCGGGCGA GGCGATCGTC
GCGCTCGGTC TGACGGAGCC GCGAGGCGGC TCCGACGCAG CGCATCTGCA GACGAAAGCG
CGCGCCGATG GCGACGGCTA CGTCCTGTCG GGCGAGAAAA CCTCGATCTC GATGGCCGAG
CAGGCTGATT ACATTCTTGT GCTCGCGCGC ACGGATGAAA GCAATCCGGG CGCTGGCGGT
GTGTCGGCTT TTCTGGTGCC GCTCGACGCG CCGGGTATCA CCTGTTCGAG CTTCGATGAT
GTAGGTTCGA AAGCGGTCGG CCGCGGTTCG GTATTCTTCG ACAATGTTAA TGTGTCGTCG
CGCTACATGG TCGGCCCGGA GGGCGAAGGT TTCCGGAAGG TCATGCAGGG GTTCGATTAT
TCCCGCGCGC TGATCGGCCT GCAATGTCTG GCTCCCGCCT TCGCATCGCT GGAAGAGACC
TGGAAGTATG TGACCGAGCG CGTTGCCTTC GGCAATCCGC TGGCCAAATA TCAGGGTGTC
ACGGAACCGC TGGCCGAAGC CCAGACGCTG CTCGAGGCGG CGCGTCTGCT TTGCTACAAG
ACGCTTTGGC TCCGCGACAA TGATTTGCCG CATACCGCCG AAGCCGCAAT GTGCAAATGG
TGGGCACCCA AGACGGCTTT CCAGGTCATC CACCGTTGCC TGCTCACGCA CGGACATGGC
GGTTACAGCA CTGATCTGCC TCATCAGCAG AGATTGCGCG ACGTGATGGG GCTTCAGATC
GGCGACGGCA CCGAGCAAAT CCAGAAGATG ATCATTTCGC GCGAGAAAGT CGGCCGGGTG
GCCGTGCCTT ATGCGTGA
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| Protein sequence | MDFAFTSDQG AIRDTAARFA RERLAPAYKV RETAGAIDRQ LVRDMGELGL VGADLPEKFG
APGLDSVTTG IIIEEISRGD ISVGYVQLLG SLMGSIVAAH ARPEVADEIV PKICSGEAIV
ALGLTEPRGG SDAAHLQTKA RADGDGYVLS GEKTSISMAE QADYILVLAR TDESNPGAGG
VSAFLVPLDA PGITCSSFDD VGSKAVGRGS VFFDNVNVSS RYMVGPEGEG FRKVMQGFDY
SRALIGLQCL APAFASLEET WKYVTERVAF GNPLAKYQGV TEPLAEAQTL LEAARLLCYK
TLWLRDNDLP HTAEAAMCKW WAPKTAFQVI HRCLLTHGHG GYSTDLPHQQ RLRDVMGLQI
GDGTEQIQKM IISREKVGRV AVPYA
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