Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1767 |
Symbol | |
ID | 5455564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1920220 |
End bp | 1921080 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640877348 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001413043 |
Protein GI | 154252219 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.189281 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGTTC AGAAGACTCG ATTCGGGTTT TCCGATGAGG AACTGAAGGC TCTACCCACG GTTTATCGAG CTGATCTTTT TTCGGGGAAA ACGGTCGTCG TTTCCGGCGG CGGCAGCGGT TTCGGCAAGG CGATTGCCTG TCTTTTGGCA CGACTGGGCG CAAACGTCGC CATATGCGGG CGCAACGAAG AAAAACTTGC CGCGACGGTT TCACTTCTGG AAAGCATGGG CGCGCAGGTC TTCAGCCGGT CCCTGACCAT ACGCGATCCG GATCAGGTTG ACGGTTTTAT TGAAGCGGTC TGGGATAAAT TCGGCGCGCT CGACCTTCTC GTGAACAATG CCGGCGGCCA GTTTCCGCAA ATGGCCCTCG ACTTCAAGGT CAAGGGATGG AACGCCGTCA TCGACACCAA TCTCAACGGC ACCTGGTACA TGATGCAAAG CGCCGCGCGG CAGTGGGTCG AAAGAAAGAC CCCCGGCTCG ATCGTGAACA TCATCGCGGA CATATGGCGC GGAATGCCGG GCATCGCGCA CACATGCGCG GCGCGCGCCG GTGTTGCCTA TCTGTCCAAA TCGGTGGCCG TCGAATGGGC ACCCCATCGC ATCCGCGTCA ACTGCGTCGC ACCGGGCGTC TGCGAAACGA GCGGTTTTGC GCAATATCCA CCCGAAGGTC TCAAGACCTA TCCTGGCGCA AATCCGATGC TGCATGTCGG CGACGCCCAC GACATCGCCG AGGCTGTTGC CTATCTCGCC TCGCCGGGCG CCAAGTTCAT TACCGGCGAG GTATTGACGG TCGATGGCGG CGAGCAGCTC TGGGGCGACC CGTGGCCCCC CGGACGACCG GATTATTTCC AGCCAAAGTA A
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Protein sequence | MEVQKTRFGF SDEELKALPT VYRADLFSGK TVVVSGGGSG FGKAIACLLA RLGANVAICG RNEEKLAATV SLLESMGAQV FSRSLTIRDP DQVDGFIEAV WDKFGALDLL VNNAGGQFPQ MALDFKVKGW NAVIDTNLNG TWYMMQSAAR QWVERKTPGS IVNIIADIWR GMPGIAHTCA ARAGVAYLSK SVAVEWAPHR IRVNCVAPGV CETSGFAQYP PEGLKTYPGA NPMLHVGDAH DIAEAVAYLA SPGAKFITGE VLTVDGGEQL WGDPWPPGRP DYFQPK
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