| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1621 |
|---|
| Symbol | |
|---|
| ID | 5456507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 1754624 |
|---|
| End bp | 1755889 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640877194 |
|---|
| Product | crotonyl-CoA reductase |
|---|
| Protein accession | YP_001412897 |
|---|
| Protein GI | 154252073 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01751] crotonyl-CoA reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000162503 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 78 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTATA CGGAGAAAAA AGATCTCTAC GAGGTCGGTG AGATACCGCC CATCGGTCAT
GTGCCGAAAA ACATGTATGC ATGGACGATC CGCAGGGACC GGCAGGGACC GCCGCAGCAG
GCGATGCAGG TCGAGGTCGT GCCGACATGG GAGATCGACA GCAACGAGGT GCTCGTTCTC
GTGATGGCGG CGGGCGTCAA CTACAATGGC GTATGGGCGG GCCTTGGCAC GCCGATCTCC
GTCTTCGACG TTCACAAGCT GCCCTATCAC ATCGCAGGCT CGGACGCTTC CGGCATCGTC
TACGCGGTTG GCGCCAAGGT GAAGCGGTGG AAGGTCGGCG ACGAAGTCGT CATCCATTGC
AACCAGGACG ATGGCGACGA CGAGGAATGC AATGGCGGCG ACCCGATGTT CTCGCCGACG
CAGCGCATCT GGGGCTACGA GACGCCGGAC GGCTCTTTCG CGCAGTTCTG CCGCGTGCAA
TCGCAGCAGC TGATGCCGCG CCCGAAGCAC CTCACCTGGG AAGAGAGTGC CTGCTACACA
CTGACATTAG CGACGGCCTA CCGCATGCTC TTCGGCCACC GCCCGCACAT CCTTTCGCCC
GGACAGAACG TTCTGGTGTG GGGCGCGAGC GGAGGTCTCG GCTCCTTCGC GGTGCAGCTC
TGCGCGACGG CCGGCGCCCA TGCCATCGGC GTTATTTCCG ACGACAGCAA GCATGATTTC
GTGATGTCGA TGGGCGCGAA GGGCGTCATC AACAGAAAGA ATTTCAATTG CTGGGGCCAG
TTGCCGAAAG TGAACTCCGA GGAGTTCAAC GACTTCATGA AAGAGGCGCG CAAGTTCGGC
AAGGCAATCT GGGACATCAC CGGCAAGGGT GTCGACCCCG ATATCGTGTT CGAACACCCC
GGCGAGTCGA CCTTTCCGGT TTCCTGCATG GTGGCGAAGC GCGGCGGCAT GGTCGTCTTC
TGCGCCGGTA CGACGGGCTT CAACCTCACC TTCGACGCAC GCTTCGTCTG GATGCGCCAG
AAGCGCATTC AAGGTTCGCA TTTCGCGCAT CTGAAACAGG CGAGCGCGGC GAACCAGCTC
GTTATCGAAC GGCGCATCGA CCCCTGCATG TCGGAGGTGC TTCCGTGGGC GGATATTCCG
CTGGCGCATA CCAAGATGTG GAAGAACGAA CATCTGCCGG GCAACATGGC AGTGCTGGTT
TCCGCCGCGC GGCCGGGCCT CAGAACGGTC GAGGATACGA TTGAAGCGGG GATAAGGGCG
GCCTGA
|
|---|
| Protein sequence | MTYTEKKDLY EVGEIPPIGH VPKNMYAWTI RRDRQGPPQQ AMQVEVVPTW EIDSNEVLVL
VMAAGVNYNG VWAGLGTPIS VFDVHKLPYH IAGSDASGIV YAVGAKVKRW KVGDEVVIHC
NQDDGDDEEC NGGDPMFSPT QRIWGYETPD GSFAQFCRVQ SQQLMPRPKH LTWEESACYT
LTLATAYRML FGHRPHILSP GQNVLVWGAS GGLGSFAVQL CATAGAHAIG VISDDSKHDF
VMSMGAKGVI NRKNFNCWGQ LPKVNSEEFN DFMKEARKFG KAIWDITGKG VDPDIVFEHP
GESTFPVSCM VAKRGGMVVF CAGTTGFNLT FDARFVWMRQ KRIQGSHFAH LKQASAANQL
VIERRIDPCM SEVLPWADIP LAHTKMWKNE HLPGNMAVLV SAARPGLRTV EDTIEAGIRA
A
|
|---|
| |