Gene Plav_1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1605 
Symbol 
ID5454439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1742157 
End bp1742681 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content64% 
IMG OID640877178 
Producthypothetical protein 
Protein accessionYP_001412881 
Protein GI154252057 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.31864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGACA GTTTCGCGCA GGGCGAGAGA GCCCGCAAGA TCACGCACGA ACCGCAATTC 
ATCGACACGC CGGAGCATTC CGCCGTGGCG GAATTTCACG CCTATCTGGA GGCGAAGCGC
GGCTCGCGCG AAATGGCGGA TCGCGCCGAC ATAAAGCCGT CCGAGATTGT CCGCTTCCTG
CCCAACATGA TCATCGCCGA AGCGGTGGAC GGCGGCGAAG ACTTCCGTAC ACGTCTCTTC
GGCACGGCGC TCGTCGAACT GCTGGGCGAG GAGCGGACGG GCAAGCTGCT CTCCGAATTC
GCCGAGGAAA GCAGCCTCGA CACCGACCCC GCCGCCGTCC AGACCCGCTG GCTCTACATC
ACGCGGAAAG CCTTTTTCGG CCGCAAGCCC GTTTTCCTGA AAGTACCTTT CGCCGCCTCG
AACCGGCTCT ACCTTGTCGG ACATGCGATC TCGGCACCAC TCACCGCCGG CGGCACCGAA
CCGGCGCAGA CCATCGGCGC GATGTTCGTC ACCCGCGCGG ATTGA
 
Protein sequence
MDDSFAQGER ARKITHEPQF IDTPEHSAVA EFHAYLEAKR GSREMADRAD IKPSEIVRFL 
PNMIIAEAVD GGEDFRTRLF GTALVELLGE ERTGKLLSEF AEESSLDTDP AAVQTRWLYI
TRKAFFGRKP VFLKVPFAAS NRLYLVGHAI SAPLTAGGTE PAQTIGAMFV TRAD