| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1550 |
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| Symbol | |
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| ID | 5454032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1691226 |
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| End bp | 1692143 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640877123 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001412826 |
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| Protein GI | 154252002 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.167031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAACT GGAAGAACTC AGCGCGCGCC TTCTGGGTGG CCTTTGCGCC ACCTACATTC
TGGCTTGCCG CTTTCTTCAT CCTTCCGCTG TCGCTGATCT GGCTTTACAG CTTCAGCTCC
AAGACCGGCA TTCTCGACAT CACGCTGGAC TGGAATCTCC AGCAATATGC CCGCGCGCTT
GAGCCGCTCT ATCTCGGCAT TTTCTGGAAG TCGATATGGA TGGCGGCGGC AACGACCTTC
ATCTGCCTCG TCGTTTCCTT TCCCGTCGCC ATCGCCATCG TCTTTTCAAA GCCGCAGATG
CGGATGTGGC TGCTGCTGCT CGTCATCCTG CCCTTCTGGA CCAACCTGCT GATCCGCACC
TATGCGCTGA TCGCGGTGCT GCGCACCAAC GGCTTCATCA ATAACGGGCT TGAATGGATC
GTGGTGAACG CGGACTGGGC GCTCTCCTTC ATCGGCCTTG GCGACAACAC CATCATCGGC
CCCTTCACGC CGCTGAAGCT GCTCTACAAC AACACCGCCG TTATTTTCGG CCTTGTCTAT
GTGAGCCTGC CCTTCATGGT GCTGCCGCTC TATGCCGCGC TCGACCGGCT CGACCGCTCC
TATCTCGAGG CGAGCCTCGA TCTCGGCGCC GGGCACACAC GCACCTTCTT TTCCATCGTC
GTGCCGCTGG CGCTGCCGGG CATCGCGAGC GGCATCGTCA TCACCTTCAT TCCGGCCATG
GGCTCCTATC TCACGCCCGA CCTGCTCGGC GGGACGGACA GCTACATGAT CGCCAACGTG
ATCGCGAGCC AGTTCAAGCA GGCCAATAAC TGGCCCTTCG GCGCGGCGCT GAGCTTCCTT
CTCATGTATG CGACCTTCTT CGCGCTGGCC ATTCGCGCCG TGCTGATGAG GAAAGAAGGA
CGGGGAGACA AGCGATGA
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| Protein sequence | MENWKNSARA FWVAFAPPTF WLAAFFILPL SLIWLYSFSS KTGILDITLD WNLQQYARAL
EPLYLGIFWK SIWMAAATTF ICLVVSFPVA IAIVFSKPQM RMWLLLLVIL PFWTNLLIRT
YALIAVLRTN GFINNGLEWI VVNADWALSF IGLGDNTIIG PFTPLKLLYN NTAVIFGLVY
VSLPFMVLPL YAALDRLDRS YLEASLDLGA GHTRTFFSIV VPLALPGIAS GIVITFIPAM
GSYLTPDLLG GTDSYMIANV IASQFKQANN WPFGAALSFL LMYATFFALA IRAVLMRKEG
RGDKR
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