| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1500 |
|---|
| Symbol | |
|---|
| ID | 5454028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 1631474 |
|---|
| End bp | 1631932 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640877073 |
|---|
| Product | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ |
|---|
| Protein accession | YP_001412776 |
|---|
| Protein GI | 154251952 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4706] Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.438628 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 76 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAGG CGTTTCCCCA TATCGGCGAG CTCGTCCGGC ACAGCGGCAC CATGCTGCTG
ATCGACCGGC TGGTCGAAGC GTCGCAGACC CATGCGGTCT CGGAAGTGAC GATCTCCGAA
CACGCCACCT TCTTTCGCCC CGGCGCGGGC GTTCCCGCCT ATGTCGGCCT TGAATATCTG
GCGCAGACGA TTGCCGCCTA TGACGGCGAG CTCCGCCGCG GGAGCGGCGA GCCGCCCGCT
ATAGGTTTTC TTCTCGGCAC ACGGCGCTAT AAATCGACGC GGCATTATTT TGCGGACGGC
GAAACGCTTC GCGTCCGCGT CGATTTAACT TTCAACGAGA ACGGCATGGC GGCTTTCGAC
GGTGTCATCC GTATCGGCGG CGAGGAATGC GTCACCGCCA CCATCAATGT CTACCGGCCC
GAAGACGGTT CGTTCGACAT GCCGGGAGAA GCAACATGA
|
|---|
| Protein sequence | MQQAFPHIGE LVRHSGTMLL IDRLVEASQT HAVSEVTISE HATFFRPGAG VPAYVGLEYL
AQTIAAYDGE LRRGSGEPPA IGFLLGTRRY KSTRHYFADG ETLRVRVDLT FNENGMAAFD
GVIRIGGEEC VTATINVYRP EDGSFDMPGE AT
|
|---|
| |