Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1499 |
Symbol | |
ID | 5453540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1630302 |
End bp | 1631474 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640877072 |
Product | Beta-ketoacyl synthase |
Protein accession | YP_001412775 |
Protein GI | 154251951 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCGC CCGTCTACAT CGCCGCATCC TCGGTCGCCA ATGCGCTTGG CGCGGATTGG GCACAAGTGT CGGATGCGCT TTTCGCGGGC GATCCGTCGG GGCTCGCGCA AACGGAAACA CTCAGCGACG GCCGCACGCC GCCTGTCGGC CGGCTGCGTT TTCCCCTTGC CGACCTGCCT CCCGCACTTG CCGAGTGGGA AAGCCGCAAC AATCGTCTCA TCCATCATTG CCTTCTGCCG CTTCTGCCCG CAATCCACGA AGCCCTTTCG GCGTACGGCC CGTCCCGCGT CGGCATCGTG ATCGGCACCA GCACATCCGG CATCGAGAGT TGGGAACATG CGCTGGCGCG GAAGATGACG GGCGGCGTCT GGCCGAATGA TTTTCATTTC AGGCGTCACG AGCTTGGCGA TCCCGCCGCC TTCGTTCAGG CGGTCACGGG CGCGGGCGGC CCCTGCTACG GCGTCTCCAC TGCTTGCACA TCCGGTGGCA AGGCCATTGT CAGCGCCGCG CGCCTGCTGC AGGCGGGGCT CTGCGATGCG GTCATCACCG GCGGCGTCGA TACGCTGTGC GGCCTGACGC TCAATGGTTT CTCGGTTCTC GATTCCATCT CTTCCGCCCG CTGCAATCCC TTCAGCACAA ATCGCGATGG CATCAATATC GGCGATGGCG GTGCGCTCTT CCTGCTGACG CGCGAAGAAA ATGACGTCCG CATCGCCGGC TGGGGTGAGA GCTCCGATGC CCACCATCTG AGCGCGCCGG ACCCGGAAGG CGGCGGTGCC GCGCTCGCCA TCGGCCAGGC GCTCGGTCAT GCGGGCATTG AAGCCGCCGA CATTGCCTAT CTCAATCTCC ATGGCACGGC GACGCGCCTC AACGATGCGA TGGAGGCGCA GGTCACGCAG CGGATTTTCG GCGACGATCT CCCCTGCAGT TCGACCAAGG CGCTGACGGG CCATATGCTC GGCGCGGCGG GCTCCTGCGA GGCGGCATTC GTCTCCATGG CGCTTTCGCG CGGCGAGGCG CCGCCGCATC TCTGGGACGG CGAAGCAGAC CCGGCGCTTC CCGTGCTTCA TCTCACCGAT CGTCCCGGCG AGCGTGTCGA AGGCCGCTAC ATGATGAGTT GTTCCTATGC CTTTGGCGGC AACAATCTCG CCCTCATCCT GGCGCGCGCG TGA
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Protein sequence | MNAPVYIAAS SVANALGADW AQVSDALFAG DPSGLAQTET LSDGRTPPVG RLRFPLADLP PALAEWESRN NRLIHHCLLP LLPAIHEALS AYGPSRVGIV IGTSTSGIES WEHALARKMT GGVWPNDFHF RRHELGDPAA FVQAVTGAGG PCYGVSTACT SGGKAIVSAA RLLQAGLCDA VITGGVDTLC GLTLNGFSVL DSISSARCNP FSTNRDGINI GDGGALFLLT REENDVRIAG WGESSDAHHL SAPDPEGGGA ALAIGQALGH AGIEAADIAY LNLHGTATRL NDAMEAQVTQ RIFGDDLPCS STKALTGHML GAAGSCEAAF VSMALSRGEA PPHLWDGEAD PALPVLHLTD RPGERVEGRY MMSCSYAFGG NNLALILARA
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