| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1493 |
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| Symbol | |
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| ID | 5455934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1623748 |
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| End bp | 1625334 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877066 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_001412769 |
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| Protein GI | 154251945 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase
[TIGR01226] phenylalanine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGCAG TAGCCGACGA TATTTCCGGT GAAGTGGTAT TCGGCGAGAC GCGCCTCACC
ATTGAGCATG TCCGTGCCAT TGCGGCGGGC ATCGCGCCCT CGCGTCTCGG CGCCGGTGCC
GGCTTCCGGG AAGCTGTCGC GCGCTCAGCC GCTCATGTCG ATGAGACGCT CCGCCGCGAT
GGCATGATCT ATGGCGTCAC GACCGGCTAT GGCGATTCAT GCACGACGCC TGTCTCCGAC
GAGTTGATTG CCGAATTGCC GCTCCACCTC ACAAGGTTTC ACGGAGTTGG CACGGGGCGC
ATTCTTTCGG AAGCCGAAAC GCGTGCGGTC ATGGCTGTTC GTCTTGCCTC GCTCGTTCAC
GGCTGGTCCG GCGTCAGTCT CGGCCTTGTC GAACTCCTCG CCGAAATGTT GAAGCAAAAC
ATCCTGCCCA TGATCCCCGC CGAGGGATCG GTCGGCGCGA GCGGTGACCT GACGCCGCTC
AGCTATGTCG CGGGTGCGCT GGCTGGGGAG CGGATGGTCC GCTTCAACGG ACGGGAGATG
ATGTCGGCGG ATGCGTTCCG TGAAGCAGGT CTCGCGCCCA TCGCGCTGCG TCCGAAAGAG
GCGCTGGCTG TGATGAACGG CACCGCCGTC ATGTCCGGTC TCGGCGCCAT CGCTTTCTCC
AAGGCGATCC ATCTCGCCGC GCTGTCGACG CGCCTCACCT CGCTCGTCTG CATGGGCTTG
ATGGGCAATC CCGCGCATTT CGACGAGCGG CTTCACAGTG CAAAGCCGCA TCCCGGTCAG
ATGCTTGTTG CCGCCCGCAT TCGCGCCGAT CTCGCCGCCT TCGCGCGCAG GCATGAGCCG
TCGCGCCTGC AGGACCGGTA TTCCATCCGC TGTGCGCCGC ATGTCATCGG CGTGCTGGAG
GACATGTTGC CTTCCTTCCG CACCATTCTT GAAACGGAAA TCAACAGCGC CAATGACAAC
CCGCTGATCG ATCCCGCCAG CGGCGACATT CTTCATGGCG GCCATTTCTA TGGCGGCCAT
GTCGCCTTCA CGATGGACAG TCTGAAAAAC CTCGTTGCGA ACATCGCCGA TCTGATGGAC
CGGCAGATGA CGCTTCTCGT CGACACGCGG TTCAATAATG GTCTCCCCGC AAATCTTTCG
GGCGTCGAAG GTCCGCGCGC GGCCATCAAT CACGGGTTGA AGGCGCTCCA GATCGCAACC
TCCGCCTGGA CCGCCGAAGC GTTGAAACTC ACCATGCCGG CCAGCGTCTT TTCGCGATCG
ACCGAATGTC ACAATCAGGA CAAGGTTTCG ATGGGCACCA TCGCCGCGCG CGACGCGCTG
CGCGTGCTCG AACTCACGGA ACAGGTGGCA GCGGCCCTTG CCATCGCCTG CCGCCAGGCA
ATAAGGCTTC GCCTCCGCAG CGGCGAGATT GCGGCATCCG ATCTTGAAGG CCCGCTCACC
GCTTTCGTCG AGGAACTTGA AGCCGCCATT CCCTTCATCG AGGAAGACAG GCCGCTCGAT
CGCCTGCTTG GCGATCTTTG CGCCGGTATC GATCGCGGTG CTTGGACGCT TGATTGGCCG
TTCGGGCGGG CAGGGGGGAG CCTATGA
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| Protein sequence | MDAVADDISG EVVFGETRLT IEHVRAIAAG IAPSRLGAGA GFREAVARSA AHVDETLRRD
GMIYGVTTGY GDSCTTPVSD ELIAELPLHL TRFHGVGTGR ILSEAETRAV MAVRLASLVH
GWSGVSLGLV ELLAEMLKQN ILPMIPAEGS VGASGDLTPL SYVAGALAGE RMVRFNGREM
MSADAFREAG LAPIALRPKE ALAVMNGTAV MSGLGAIAFS KAIHLAALST RLTSLVCMGL
MGNPAHFDER LHSAKPHPGQ MLVAARIRAD LAAFARRHEP SRLQDRYSIR CAPHVIGVLE
DMLPSFRTIL ETEINSANDN PLIDPASGDI LHGGHFYGGH VAFTMDSLKN LVANIADLMD
RQMTLLVDTR FNNGLPANLS GVEGPRAAIN HGLKALQIAT SAWTAEALKL TMPASVFSRS
TECHNQDKVS MGTIAARDAL RVLELTEQVA AALAIACRQA IRLRLRSGEI AASDLEGPLT
AFVEELEAAI PFIEEDRPLD RLLGDLCAGI DRGAWTLDWP FGRAGGSL
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