| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1455 |
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| Symbol | |
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| ID | 5455593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1586079 |
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| End bp | 1587320 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877028 |
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| Product | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase |
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| Protein accession | YP_001412732 |
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| Protein GI | 154251908 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 86 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGG AAATTCGCGT GCCCACGCTG GGCGAGTCGG TGACGGAGGC CACTGTCGCG
AAATGGTTCA AGAAGCCGGG CGACAGCGTG GCCGTGGACG AGCCGCTGGT CGAGCTTGAA
ACAGACAAGG TAACGGTCGA AGTGCCGGCG CCTGCCGCCG GTGTCCTGTC TGAAATCGTC
GCGGCCGATG GCGAGACGGT CGAGGTCGGC GCGCTGCTCG GCGCGATCGG CGAAGGTGGT
GCGAAAGCCG CCGCGCCCGC CGCGAAGAAG GAAGAACCGA AAAAGGCCGA GGCGAAGCCG
GAGCCGAAAA AGGAAGAGCC GAAAAAGCAG GAAGCGAAGG AGCCGGCAAA GCCTGCCGAT
GCCGAACCTT CGCCCGCCGT CCGCCGCGTC GCCGCCGAAA ACGATCTCGA TGTTTCGAAG
GTCGAAGGCA CCGGCAAGGG CGGCCGCGTG ACAAAGGCCG ATGCCGAGGA AGCCGCATCC
GGCAAGGCCG AAGCGAAGCC CTCCGCCCCC GTTCAGGCGC CCGCCGCGCG GGCGGATAAT
GGCGCCCGCG AAGAGCGAGT GAAGATGACG CGGCTCCGCA AGACCATTGC GACGCGCCTC
AAGGAAGCAC AGAACACCGC CGCCATGCTC ACCACCTTCA ACGAGGTGGA CATGACGAAC
GTCATGGCGC TCCGCACGCA ATACAAGGAT CTCTTCGAGA AGAAGCATGG CGTGCGTGTC
GGCTTCATGG GCTTCTTCGT CAAGGCCTGC ATCCATGCGC TGCGCGAGCT TCCGGCCGTC
AATGCCGAGA TCGACGGCGA GGAACTCGTC TACAAGAATT ACTACAATAT CGGCGTTGCC
GTCGGCACGG ATCGCGGCCT TGTCGTGCCG GTGCTGCGCG ACGCGCAGGA CCTTTCGCTC
GCCGAAATCG AAAAGGCGAT CAACAATCTC GGACGGCGTG CCCGCGATGG CGACCTGAAG
CTCGACGATT TGCAGGGTGG CACCTTCACC ATCTCGAATG GCGGCGTCTA TGGCTCGCTC
ATGTCGACGC CGATCCTCAA CGCGCCGCAG TCCGGCATTC TCGGCATGCA CAAGATCCAG
GAGCGGCCGA TGGTCGTCGG CGGCAAGATC GAAATCCGCC CGATGATGTA TCTCGCGCTC
TCCTACGATC ACCGCATCGT CGACGGCAAG GAAGCGGTCA CCTTCCTCGT CCGCGTGAAG
GAATCGCTGG AAGATCCGCA ACGTCTCCTG CTCGACCTCT GA
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| Protein sequence | MATEIRVPTL GESVTEATVA KWFKKPGDSV AVDEPLVELE TDKVTVEVPA PAAGVLSEIV
AADGETVEVG ALLGAIGEGG AKAAAPAAKK EEPKKAEAKP EPKKEEPKKQ EAKEPAKPAD
AEPSPAVRRV AAENDLDVSK VEGTGKGGRV TKADAEEAAS GKAEAKPSAP VQAPAARADN
GAREERVKMT RLRKTIATRL KEAQNTAAML TTFNEVDMTN VMALRTQYKD LFEKKHGVRV
GFMGFFVKAC IHALRELPAV NAEIDGEELV YKNYYNIGVA VGTDRGLVVP VLRDAQDLSL
AEIEKAINNL GRRARDGDLK LDDLQGGTFT ISNGGVYGSL MSTPILNAPQ SGILGMHKIQ
ERPMVVGGKI EIRPMMYLAL SYDHRIVDGK EAVTFLVRVK ESLEDPQRLL LDL
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