Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1366 |
Symbol | |
ID | 5456330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1499611 |
End bp | 1500798 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640876938 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001412643 |
Protein GI | 154251819 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.66758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCGA TCATGGAGGA CGCACCGCTC AATTTCGATG AACCGGAACA TGTCCGGATG TTGCGCGACG CAACACGGCG TTTCGCCGAA GCGGAAATGC CGCGCGAGAA GGCGCGGGAG TGGGATCGCG GCAATATCTA TCCGGCCGAT GTGATGAAAA AGCTCGGCGC TATGGGCATG ATGGGCCTCA CCGTCGACGA GCGCTATGGC GGTGCCGGCG TCGATATTTA CGCGACCATG GCGGTCATCG AGGAAATCGC GAAACGCTCC GTCGCCGTCG CCTGCCCCTA CATCATGGCG GTCTGCTATG CGGGAATGAA CCTTGGCGAG AGCGTGTCGG AAGAACAGAA GCAGGAATTA TTGCCGAAAG TCGCTTCCGG CAATCTCCTC TTCGCCTATG GCCTTTCCGA GCCGAATGTC GGCGGCGATC TCGCCACCGT CGAAACGACC GCGCGGCGCG AGGGCGACGA ACTCGTCATC AACGGCACAA AGCGCTGGTG CACCGGCGCT CATATCGCCG ACTACATCTT CTGTCTGCTG CGGACCGGCC CGAAGGAAGA CAAATACAAG AATCTCAGCA TCGTTCTCGT CCCGCCGACG CTTCCCGGCA TCTCCATCAC GCCGCTCGGC CATCTCGGCA TTCGCGGCGT GGAAACGAAG GATGTGAGTT TCGACGATGT GCGCGTGCCC GTGAGCAATA TTCTCGGCGG CCAAGCGATG TGGAACAAGG GCTGGAGCCA GCTTGCGGGC CGTGCGCTTG AAGTCGAGAA ACTTGAACTT TCCGCCTGTG CGCTCGGTCT TTCCGAGGCC GCGCTCGCGG ATGCGTGGCG ATACGCCGAG GAGCGTACGC AGTTCGGCCG CGCCATCGCC GGTCATCAGG CGATCCGTCA CACGCTTGCG GAGGCGCAGA CGCACGTCCG CGCCATGCGT CTCATGCTCT ACAGCGCCGC CTGGCTGGCC GATCGCGGCC GTCCCTGTTC CGTCGAGACA TCGATGGCCA AGCTCTTCTG CTGCGAAGGT GCGGCGGAAG TCACGCAGAT GTGCATGCGT GTCACCGGCG CCTATGGCCT CTCCGACCAG ATGGACATGG AACGCTATGT GCGTGATGCG GTGAGCCTCC CCATCGTCGG AGGCTCGTCC AACATGCAGA AAAACAATAT CGCGAACAGG CTGAAGCTCG GACAGTAA
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Protein sequence | MDAIMEDAPL NFDEPEHVRM LRDATRRFAE AEMPREKARE WDRGNIYPAD VMKKLGAMGM MGLTVDERYG GAGVDIYATM AVIEEIAKRS VAVACPYIMA VCYAGMNLGE SVSEEQKQEL LPKVASGNLL FAYGLSEPNV GGDLATVETT ARREGDELVI NGTKRWCTGA HIADYIFCLL RTGPKEDKYK NLSIVLVPPT LPGISITPLG HLGIRGVETK DVSFDDVRVP VSNILGGQAM WNKGWSQLAG RALEVEKLEL SACALGLSEA ALADAWRYAE ERTQFGRAIA GHQAIRHTLA EAQTHVRAMR LMLYSAAWLA DRGRPCSVET SMAKLFCCEG AAEVTQMCMR VTGAYGLSDQ MDMERYVRDA VSLPIVGGSS NMQKNNIANR LKLGQ
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