Gene Plav_1282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1282 
Symbol 
ID5456903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1415430 
End bp1416563 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content60% 
IMG OID640876852 
Productporin 
Protein accessionYP_001412559 
Protein GI154251735 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TTCTTCTTGG GACGACTGCT CTCGTCTCGG CTGGCCTGAT CGCCGGTCCG 
GCGCTCGCGA GCGATCCGCT GACCGTAACG GTCGGCGGCA CGGTCACGGC CGGCTTCTAC
GCCATCGACG CGGATGATGT ATTTGGCGTT GGTTTCAACG ACACCGCCGT CAAGCTCGTC
GCGCGCAACA TCGACATCAA GGCCGAAGGC ACGCTCGACA ACGGCATGGT CGCCGGTGTC
CTCGCGACGC TGTCGCTGGG CGACGACTGG AACACGAACT ACAACAACAA TGACGCCGTC
TTCCGCGAAC TCTTCGCCTA TCTCGAAGGC GGCTTCGGTC GTTTCGAAAT CGGCGGCACT
GACGGTTCTG CCTTCAAGAT GCACTACACC TCGCCGTGGT TCGTTCCCGG CAACGGCGTC
GACAGCCCGA ACATCCTGAA CGGCCTGACT TCCTACTATG GTTTCGGTCT GCGTCATTCG
ACGTTCTCGC TGATGGCTGC CGATGCGAAC AAGGTGACCT ATTTCACGCC GCGTTTCGCC
GGCTTCCAGC TCGGCCTTTC CTATACGCCG GAAACGACGT TCAACGGACC GAACCCGAAT
GGTCTCGGCC TTGTCCCGAA CAACACTTCA ATCGAAGATG TTTTCGAAGT GGCCCTCAAC
TATGCCGGCT CCTTTGGTTC GGTTGATTTC GGTGTTGACG GCTTCTACGT GACGGGCGAC
GCCCCTGCTG GCGGTGCAAG CGATCCGGAA GAAATCGGTT TTGGCGCCAA TCTCGGCCTG
GCCGGCTTTA CGCTGGGCGG CGCTTGGTAT CAGTCTGAAG ATCTGGGTGT TTTCGGCGTT
TCAACGCCGC TCCCCGGCGC CTTCGGCGTA GAAGAAGAAG TCTGGACCGT GGGTCTTTCC
TATGCGACGG GCCCGTGGAC AGTGGGTGTT GCCTATCTCG AAGACGAAAT CACTTCGGGC
ATCGGTGGCG CCGACATCAA GACTTGGCAA GCTGGCGGCG GTTATAACCT CGGTTCGGGC
GTCGATATCG GCCTCGATCT GCAGATGAGC GACACCGACG CAACTGGCTT CTTCGGCCCC
GGCGCCGAGC AGGAATCCAA GTCGGCAGGT CTGGTGCTGT CGGTTTCTTT CTGA
 
Protein sequence
MKKILLGTTA LVSAGLIAGP ALASDPLTVT VGGTVTAGFY AIDADDVFGV GFNDTAVKLV 
ARNIDIKAEG TLDNGMVAGV LATLSLGDDW NTNYNNNDAV FRELFAYLEG GFGRFEIGGT
DGSAFKMHYT SPWFVPGNGV DSPNILNGLT SYYGFGLRHS TFSLMAADAN KVTYFTPRFA
GFQLGLSYTP ETTFNGPNPN GLGLVPNNTS IEDVFEVALN YAGSFGSVDF GVDGFYVTGD
APAGGASDPE EIGFGANLGL AGFTLGGAWY QSEDLGVFGV STPLPGAFGV EEEVWTVGLS
YATGPWTVGV AYLEDEITSG IGGADIKTWQ AGGGYNLGSG VDIGLDLQMS DTDATGFFGP
GAEQESKSAG LVLSVSF