| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1282 |
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| Symbol | |
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| ID | 5456903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1415430 |
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| End bp | 1416563 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640876852 |
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| Product | porin |
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| Protein accession | YP_001412559 |
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| Protein GI | 154251735 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TTCTTCTTGG GACGACTGCT CTCGTCTCGG CTGGCCTGAT CGCCGGTCCG
GCGCTCGCGA GCGATCCGCT GACCGTAACG GTCGGCGGCA CGGTCACGGC CGGCTTCTAC
GCCATCGACG CGGATGATGT ATTTGGCGTT GGTTTCAACG ACACCGCCGT CAAGCTCGTC
GCGCGCAACA TCGACATCAA GGCCGAAGGC ACGCTCGACA ACGGCATGGT CGCCGGTGTC
CTCGCGACGC TGTCGCTGGG CGACGACTGG AACACGAACT ACAACAACAA TGACGCCGTC
TTCCGCGAAC TCTTCGCCTA TCTCGAAGGC GGCTTCGGTC GTTTCGAAAT CGGCGGCACT
GACGGTTCTG CCTTCAAGAT GCACTACACC TCGCCGTGGT TCGTTCCCGG CAACGGCGTC
GACAGCCCGA ACATCCTGAA CGGCCTGACT TCCTACTATG GTTTCGGTCT GCGTCATTCG
ACGTTCTCGC TGATGGCTGC CGATGCGAAC AAGGTGACCT ATTTCACGCC GCGTTTCGCC
GGCTTCCAGC TCGGCCTTTC CTATACGCCG GAAACGACGT TCAACGGACC GAACCCGAAT
GGTCTCGGCC TTGTCCCGAA CAACACTTCA ATCGAAGATG TTTTCGAAGT GGCCCTCAAC
TATGCCGGCT CCTTTGGTTC GGTTGATTTC GGTGTTGACG GCTTCTACGT GACGGGCGAC
GCCCCTGCTG GCGGTGCAAG CGATCCGGAA GAAATCGGTT TTGGCGCCAA TCTCGGCCTG
GCCGGCTTTA CGCTGGGCGG CGCTTGGTAT CAGTCTGAAG ATCTGGGTGT TTTCGGCGTT
TCAACGCCGC TCCCCGGCGC CTTCGGCGTA GAAGAAGAAG TCTGGACCGT GGGTCTTTCC
TATGCGACGG GCCCGTGGAC AGTGGGTGTT GCCTATCTCG AAGACGAAAT CACTTCGGGC
ATCGGTGGCG CCGACATCAA GACTTGGCAA GCTGGCGGCG GTTATAACCT CGGTTCGGGC
GTCGATATCG GCCTCGATCT GCAGATGAGC GACACCGACG CAACTGGCTT CTTCGGCCCC
GGCGCCGAGC AGGAATCCAA GTCGGCAGGT CTGGTGCTGT CGGTTTCTTT CTGA
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| Protein sequence | MKKILLGTTA LVSAGLIAGP ALASDPLTVT VGGTVTAGFY AIDADDVFGV GFNDTAVKLV
ARNIDIKAEG TLDNGMVAGV LATLSLGDDW NTNYNNNDAV FRELFAYLEG GFGRFEIGGT
DGSAFKMHYT SPWFVPGNGV DSPNILNGLT SYYGFGLRHS TFSLMAADAN KVTYFTPRFA
GFQLGLSYTP ETTFNGPNPN GLGLVPNNTS IEDVFEVALN YAGSFGSVDF GVDGFYVTGD
APAGGASDPE EIGFGANLGL AGFTLGGAWY QSEDLGVFGV STPLPGAFGV EEEVWTVGLS
YATGPWTVGV AYLEDEITSG IGGADIKTWQ AGGGYNLGSG VDIGLDLQMS DTDATGFFGP
GAEQESKSAG LVLSVSF
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