| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1261 |
|---|
| Symbol | |
|---|
| ID | 5454675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 1393032 |
|---|
| End bp | 1393703 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640876831 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001412538 |
|---|
| Protein GI | 154251714 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5388] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGC GCGCAAGCGA GATCGCGGAG GGCCGGTCGG CCTGGGTGAA GCCGCTTTTG
CAGGGCGATG CCGCCGGGCG GGTCAAGGCC CGGCTCAAAA ATCCGAGCGA TCACGTTCCC
GCCGAAATCG GCGGCATTGC CCTTTCCAAT GCAGGCCGTG AAATCTATGC TTGGTGGCTC
GAGGCGCGCG GCGACAAGCC GATGCCCTCC GTCGCCGATG TCGATCTGCG CGCGCTGGTC
GAGCTTCTTC CCTATATCCG CTATCTGAGC TGGGAGGACG AGAAGCGTCT CGTCTTCCGC
ATCTATGGCA GCGCCCTTGT CGAGGGCAGC GGCTTCGACC TCACCGGCCA TAATATATTC
GGACCCGAAC ACGCGCAGGT CGCCACCGAC CGCGCACGGC TGCAGGCGCT TCATGCGCAG
CCCTGCGGCT TGCTGATGAT CCGCGATGTC TATGACAGGC GCGGCATGTC CTATCCGTGC
GAATTCATGA CGCTGCCGAT CGCGCCCGAC GCGGATGGCA AGGCGCGCGT CATCGGTACG
GTCATCCCCT GCGAGCTGGT CAGCGAGTGG GCCGTCGATG TCGTGCTCGA CCGCATCCTG
ACACTGCGCC GCGCCGTCTT CATCGATACG GGATCGGGCG TTCCTCCCGC CTCGCTCGGC
CTCGGCGTCT GA
|
|---|
| Protein sequence | MDERASEIAE GRSAWVKPLL QGDAAGRVKA RLKNPSDHVP AEIGGIALSN AGREIYAWWL
EARGDKPMPS VADVDLRALV ELLPYIRYLS WEDEKRLVFR IYGSALVEGS GFDLTGHNIF
GPEHAQVATD RARLQALHAQ PCGLLMIRDV YDRRGMSYPC EFMTLPIAPD ADGKARVIGT
VIPCELVSEW AVDVVLDRIL TLRRAVFIDT GSGVPPASLG LGV
|
|---|
| |