Gene Plav_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1170 
Symbol 
ID5453709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1300427 
End bp1301014 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content61% 
IMG OID640876741 
Producthypothetical protein 
Protein accessionYP_001412448 
Protein GI154251624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACC GCCTTATCGG GCTTGACGGT TACGGGCTGG AATGGTCTAT CGAAGGTCAC 
CCCCTCCACG GGCCTGGACG TATGACGGCC GTTTTCCCTC AAGGTTTTTT CCGCTTGGCG
TGTCTGCCTG CATGGCTGCT CGCCGTCGCA CTGCTGTGCG TGCCCTTGGA CGCATATGCC
GTGGATGCAC GTTCGGAGCG CGCCTCCCTC AACCTTGCGT CCCGAGGAGT CGAAGCCGCG
GCCACAGGGC GTTTGCTTGA TGCCCAACGT CTTCTTGAGG AGGCGATGGT GGTGAACCCT
GCCAATACCC GCGCCATCAC GGAACTCGGC AACGTCCATG AGGCGCGTGG CAACGCGAAA
CTCGCGCGCA AATACTATCG CCTCGCTCTG GAGATAGATC CGGTCGCGCC CGATGCCCTA
AGCAAGCTTG CATTGCTCGA TATTTCCGAA GGCAATCGAG CTGCGGCGGT AGGGGCGCTA
CGCAAGCTGC AGGTCATCTG TCCTGCTTGT ACGCAAACGC AGAAACTTTC CAGCGCTCTC
AGCGCCGGGA CAACGTCCCC ATCCGATGTA CCCTCCTCAA ATCCGTAG
 
Protein sequence
MTHRLIGLDG YGLEWSIEGH PLHGPGRMTA VFPQGFFRLA CLPAWLLAVA LLCVPLDAYA 
VDARSERASL NLASRGVEAA ATGRLLDAQR LLEEAMVVNP ANTRAITELG NVHEARGNAK
LARKYYRLAL EIDPVAPDAL SKLALLDISE GNRAAAVGAL RKLQVICPAC TQTQKLSSAL
SAGTTSPSDV PSSNP