Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1170 |
Symbol | |
ID | 5453709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1300427 |
End bp | 1301014 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640876741 |
Product | hypothetical protein |
Protein accession | YP_001412448 |
Protein GI | 154251624 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCACC GCCTTATCGG GCTTGACGGT TACGGGCTGG AATGGTCTAT CGAAGGTCAC CCCCTCCACG GGCCTGGACG TATGACGGCC GTTTTCCCTC AAGGTTTTTT CCGCTTGGCG TGTCTGCCTG CATGGCTGCT CGCCGTCGCA CTGCTGTGCG TGCCCTTGGA CGCATATGCC GTGGATGCAC GTTCGGAGCG CGCCTCCCTC AACCTTGCGT CCCGAGGAGT CGAAGCCGCG GCCACAGGGC GTTTGCTTGA TGCCCAACGT CTTCTTGAGG AGGCGATGGT GGTGAACCCT GCCAATACCC GCGCCATCAC GGAACTCGGC AACGTCCATG AGGCGCGTGG CAACGCGAAA CTCGCGCGCA AATACTATCG CCTCGCTCTG GAGATAGATC CGGTCGCGCC CGATGCCCTA AGCAAGCTTG CATTGCTCGA TATTTCCGAA GGCAATCGAG CTGCGGCGGT AGGGGCGCTA CGCAAGCTGC AGGTCATCTG TCCTGCTTGT ACGCAAACGC AGAAACTTTC CAGCGCTCTC AGCGCCGGGA CAACGTCCCC ATCCGATGTA CCCTCCTCAA ATCCGTAG
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Protein sequence | MTHRLIGLDG YGLEWSIEGH PLHGPGRMTA VFPQGFFRLA CLPAWLLAVA LLCVPLDAYA VDARSERASL NLASRGVEAA ATGRLLDAQR LLEEAMVVNP ANTRAITELG NVHEARGNAK LARKYYRLAL EIDPVAPDAL SKLALLDISE GNRAAAVGAL RKLQVICPAC TQTQKLSSAL SAGTTSPSDV PSSNP
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