| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1112 |
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| Symbol | |
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| ID | 5456517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1221648 |
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| End bp | 1222616 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876682 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001412390 |
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| Protein GI | 154251566 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCG GGGCGATTGT TGGCGCTTTT GTGGTCGCGC TCATTATTCT CGTCGGCGGC
TACTGGTTCT TTTTCCGTGG CGGCACGGAG CCCGCACCCG CCGAAATAGC AACGCAATCA
GACACTTCCA CGGATGAAGG CGAGGCCGAA GAAGCAGCCG ATCCCGCGAT CCCGACTTTC
GACATCGTCC GCGTCCAGCG CGACGGCTCG GCGCTCGCCG CCGGCCGCTC GCTTCCGGGC
GCCCGCGTCG AGTTGAAAGC GAACGGCGAA ACCGTCGCCG AGGTCACGGC GGATGAGCGC
GGCGAATGGG TCGCGCTCCT CGAAGAGCCT TTGAAACCGG GCACTATCGA GCTTCGCCTC
ACCGCCAACA ATCCGGATGG CAGCGTGAAG GACAGCCTCC AGGTCGTCAC CGTCAACGTC
CCCGAAGACA CGAGCAAACC CGCCCTTGTC GTCCGCAGCG AGCCCGGCAA GGCAAGCACC
GTCCTGCAGG GGCCGGGCGT TCCCGCCGAT GCCGGCAGCC TCGTCCTCGA AACCGTGGAC
TACGACGAAA AAGGCAACGT CATCATTTCC GGTCGCGCCG ACGCCGGCGC CGGGGTCCGC
ATCTATCTCG GCGGCGAGCT CGTCGGTGAA ACCAGCGCCG ATGCCTCAGG CCGCTGGGAA
ATCCGTCCCG AAAACGAAAT AGCCCCCGGG CAATATGCGC TCCGCGTCGA CCAGCTCGAC
GGGGAAGGCC GCGTCGTCGG CCGCGTCGAG GTGCCCTTCG AACGCGGCGA ACCCGCCGCC
GTCCTCGCCG CCCTCCGCGA TGGCAAGGTC GTCATTCAGC CGGGCAACAA TCTCTGGACG
ATCGCCCACA ATCTCTACGG CTCCGGCTTC AGCTACACGG TCATCTACGA GGCCAACCGG
AGCCAGATCC GCGATCCGAA CCTCATCTAT CCCGGTCAGG TCCTCGAAAC TCCCGGTTTG
AGCCACTAA
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| Protein sequence | MKIGAIVGAF VVALIILVGG YWFFFRGGTE PAPAEIATQS DTSTDEGEAE EAADPAIPTF
DIVRVQRDGS ALAAGRSLPG ARVELKANGE TVAEVTADER GEWVALLEEP LKPGTIELRL
TANNPDGSVK DSLQVVTVNV PEDTSKPALV VRSEPGKAST VLQGPGVPAD AGSLVLETVD
YDEKGNVIIS GRADAGAGVR IYLGGELVGE TSADASGRWE IRPENEIAPG QYALRVDQLD
GEGRVVGRVE VPFERGEPAA VLAALRDGKV VIQPGNNLWT IAHNLYGSGF SYTVIYEANR
SQIRDPNLIY PGQVLETPGL SH
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