| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1094 |
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| Symbol | |
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| ID | 5454793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1199399 |
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| End bp | 1200094 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640876664 |
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| Product | ribose 5-phosphate isomerase |
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| Protein accession | YP_001412372 |
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| Protein GI | 154251548 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0120] Ribose 5-phosphate isomerase |
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| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGCTG ACGATCAGAA GAAAGCGGCG GCTGTCCGCG CGCTTGAGTT CGTGAAACCC
GGCATGAAAC TGGGCATGGG AACCGGCTCC ACGGCGGAAC ATTTCGTCCG CGCGCTGGGC
GAAAAGGTGA AGGCGGGTCT CGATATTGTC GGCGTGCCAA CCTCGGAGCG CACGGCCAAA
CTCGCCGCCA GCCTCGGTAT CCCCCTCACC AATCTCGACG ATACGCCGCA TCTCGATATT
ACGGTCGATG GCGCCGACGA GCTCGATGGC AAGCTCCGCC TCATCAAGGG CGGCGGCGGC
GCATTGCTGC GCGAGAAGAT CGTCGCCACG GCGTCCGACC GCATGATCGT CATTGCGGAT
GCATCGAAGC TCGTGAAGAC ACTTGGCTCA TTCCCGCTCC CCGTCGAGGT CATCCCCTTC
GGCAGCGCCG TGACGGCCCG CAAGATTGCG GAAGTCGCGA GCGCCCATGG ATGCACCGGC
AAGATGTCCC GCCGCGCCGA CGAATATGGC GAGCCCTTCT TCACCGACAG CGAAAACTTC
ATCTATGACT GTGCCTTCGG CTCCATCCCG GACCCGGACG GCCTCTCCGC GGCGCTGAAC
CGCATTCCGG GCGTCGTCGA TAATGGTTTG TTTATCGGTA TCGCCGCTAT GGCCATTGTC
GGAACGGACA AGGGTACCGA TATCATCGAA GCGTAA
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| Protein sequence | MNADDQKKAA AVRALEFVKP GMKLGMGTGS TAEHFVRALG EKVKAGLDIV GVPTSERTAK
LAASLGIPLT NLDDTPHLDI TVDGADELDG KLRLIKGGGG ALLREKIVAT ASDRMIVIAD
ASKLVKTLGS FPLPVEVIPF GSAVTARKIA EVASAHGCTG KMSRRADEYG EPFFTDSENF
IYDCAFGSIP DPDGLSAALN RIPGVVDNGL FIGIAAMAIV GTDKGTDIIE A
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